Hybrid whale algorithm with evolutionary strategies and filtering for high-dimensional optimization: Application to microarray cancer data

被引:1
|
作者
Hafiz, Rahila [1 ]
Saeed, Sana [1 ]
机构
[1] Univ Punjab, Coll Stat Sci, Lahore, Pakistan
来源
PLOS ONE | 2024年 / 19卷 / 03期
关键词
FEATURE-SELECTION; GENE-EXPRESSION; NEURAL-NETWORKS; SEGMENTATION; EXTRACTION; SVM;
D O I
10.1371/journal.pone.0295643
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The standard whale algorithm is prone to suboptimal results and inefficiencies in high-dimensional search spaces. Therefore, examining the whale optimization algorithm components is critical. The computer-generated initial populations often exhibit an uneven distribution in the solution space, leading to low diversity. We propose a fusion of this algorithm with a discrete recombinant evolutionary strategy to enhance initialization diversity. We conduct simulation experiments and compare the proposed algorithm with the original WOA on thirteen benchmark test functions. Simulation experiments on unimodal or multimodal benchmarks verified the better performance of the proposed RESHWOA, such as accuracy, minimum mean, and low standard deviation rate. Furthermore, we performed two data reduction techniques, Bhattacharya distance and signal-to-noise ratio. Support Vector Machine (SVM) excels in dealing with high-dimensional datasets and numerical features. When users optimize the parameters, they can significantly improve the SVM's performance, even though it already works well with its default settings. We applied RESHWOA and WOA methods on six microarray cancer datasets to optimize the SVM parameters. The exhaustive examination and detailed results demonstrate that the new structure has addressed WOA's main shortcomings. We conclude that the proposed RESHWOA performed significantly better than the WOA.
引用
收藏
页数:28
相关论文
共 50 条
  • [31] A hybrid multi-objective whale optimization algorithm for analyzing microarray data based on Apache Spark
    AbdelAziz, Amr Mohamed
    Soliman, Taysir
    Ghany, Kareem Kamal A.
    Sewisy, Adel
    PEERJ COMPUTER SCIENCE, 2021, 7 : 1 - 26
  • [32] Breast Cancer Classification With Microarray Gene Expression Data Based on Improved Whale Optimization Algorithm
    Devi, S. Sathiya
    Prithiviraj, K.
    INTERNATIONAL JOURNAL OF SWARM INTELLIGENCE RESEARCH, 2023, 14 (01)
  • [33] A Chaotic Hybrid Butterfly Optimization Algorithm with Particle Swarm Optimization for High-Dimensional Optimization Problems
    Zhang, Mengjian
    Long, Daoyin
    Qin, Tao
    Yang, Jing
    SYMMETRY-BASEL, 2020, 12 (11): : 1 - 27
  • [34] Filtering High-Dimensional Methylation Marks With Extremely Small Sample Size: An Application to Gastric Cancer Data
    Chen, Xin
    Zhang, Qingrun
    Chekouo, Thierry
    FRONTIERS IN GENETICS, 2021, 12
  • [35] Hybrid binary arithmetic optimization algorithm with simulated annealing for feature selection in high-dimensional biomedical data
    Pashaei, Elham
    Pashaei, Elnaz
    JOURNAL OF SUPERCOMPUTING, 2022, 78 (13): : 15598 - 15637
  • [36] The classification method based on evolutionary algorithm for high-dimensional imbalanced missing data
    Liu, Yi
    Li, Gengsong
    Li, Xiang
    Qin, Wei
    Zheng, Qibin
    Ren, Xiaoguang
    ELECTRONICS LETTERS, 2023, 59 (12)
  • [37] Hybrid binary arithmetic optimization algorithm with simulated annealing for feature selection in high-dimensional biomedical data
    Elham Pashaei
    Elnaz Pashaei
    The Journal of Supercomputing, 2022, 78 : 15598 - 15637
  • [38] A gravity inspired clustering algorithm for gene selection from high-dimensional microarray data
    Jayashree, P.
    Brindha, V.
    Karthik, P.
    IMAGING SCIENCE JOURNAL, 2024, 72 (04): : 421 - 435
  • [39] Multitasking Feature Selection Using a Clonal Selection Algorithm for High-Dimensional Microarray Data
    Wang, Yi
    Luo, Dan
    Yao, Jian
    ELECTRONICS, 2024, 13 (23):
  • [40] New Evolutionary Approaches to High-Dimensional Data
    Matosol, Luis
    Junior, Felipe
    Machado, Adriano
    Velosol, Adriano
    Meira, Wagner, Jr.
    PROCEEDINGS OF THE FOURTEENTH INTERNATIONAL CONFERENCE ON GENETIC AND EVOLUTIONARY COMPUTATION COMPANION (GECCO'12), 2012, : 1447 - 1448