Molecular docking and dynamics analysis of halogenated imidazole chalcone as anticancer compounds

被引:4
|
作者
Haryadi, Winarto [1 ]
Pranowo, Harno Dwi [1 ]
机构
[1] Univ Gadjah Mada, Fac Math & Nat Sci, Dept Chem, Yogyakarta, Indonesia
关键词
imidazole-chalcone; anticancer; molecular docking; and molecular dynamics; SIMULATIONS;
D O I
10.3897/pharmacia.70.e101989
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Cancer is one of the three biggest causes of death in the world. The development of new drugs against this disease is a serious study that must be carried out in order to reduce mortality and extend the life span of sufferers. The aim of this research was to develop a new anti-cancer drug based on halogenated imidazole chalcones have been conducted. A 18 The halogenated imidazole chalcone compound was designed and performed molecular docking. Potential compounds of molecular docking are then carried out molecular dynamics. The results of molecular docking show that the potential chalcones based on bond affinity and specific interactions are chalcones B5, B6, C5, and C6. Analysis of the molecular dynamics result parameters are root mean standard deviation (RMSD) complex, root mean square fluctuation (RMSF), Radius of Gyration, Protein-ligand hydrogen bonding, and complex stability with generalized born surface area (GBSA) method, where the potential chalcone compounds are chalcones B5 and B6.
引用
收藏
页码:323 / 329
页数:7
相关论文
共 50 条
  • [21] IMIDAZOLE AND CARBAZOLE DERIVATIVES AS POTENTIAL ANTICANCER AGENTS: MOLECULAR DOCKING STUDIES AND CYTOTOXIC ACTIVITY EVALUATION
    Taheri, Behbood
    Taghavi, Mehdi
    Zarei, Mansoreh
    Chamkouri, Narges
    Mojaddami, Ayyub
    BULLETIN OF THE CHEMICAL SOCIETY OF ETHIOPIA, 2020, 34 (02) : 377 - 384
  • [22] Molecular docking and dynamics simulation analysis of the human FXIIa with compounds from the Mcule database
    Odhar, Hasanain Abdulhameed
    Hashim, Ahmed Fadhil
    Ahjel, Salam Waheed
    Humadi, Suhad Sami
    BIOINFORMATION, 2023, 19 (02) : 160 - 166
  • [23] Chalcone Scaffold in Anticancer Armamentarium: A Molecular Insight
    Das, Manik
    Manna, Kuntal
    JOURNAL OF TOXICOLOGY, 2016, 2016
  • [24] Novel spirooxindole-pyrrolidine compounds: Synthesis, anticancer and molecular docking studies
    Arun, Y.
    Saranraj, K.
    Balachandran, C.
    Perumal, P. T.
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2014, 74 : 50 - 64
  • [25] Synthesis and in vitro Antiproliferative Evaluation and Molecular Docking Studies of Novel Chalcone-Phosphonates Derivatives as Anticancer Agents
    Mishra, Shweta
    Verma, Ekta
    Debnath, Biplab
    Chawla, Amit
    Shama Khandige, Prasanna
    Saxena, Bhagawati
    Sahoo, Nityananda
    Jana, Pardip
    CHEMISTRYSELECT, 2024, 9 (23):
  • [26] Synthesis, anticancer activity and molecular docking of hydroxyquinoline containing chalcone-1,2,3-triazole conjugates
    Nagulapally, Sridhara Devi
    Edigi, Praveenkumar
    Gurrapu, Nirmala
    Thumma, Vishnu
    Naikal, Prameela Subhashini
    CHEMICAL DATA COLLECTIONS, 2023, 48
  • [27] Comparative antibacterial analysis of the anthraquinone compounds based on the AIM theory, molecular docking, and dynamics simulation analysis
    Qi, Yanjiao
    Liu, Yue
    Zhang, Bo
    Wang, Mingyang
    Cao, Long
    Song, Li
    Jin, Nengzhi
    Zhang, Hong
    JOURNAL OF MOLECULAR MODELING, 2023, 29 (01)
  • [28] Comparative antibacterial analysis of the anthraquinone compounds based on the AIM theory, molecular docking, and dynamics simulation analysis
    Yanjiao Qi
    Yue Liu
    Bo Zhang
    Mingyang Wang
    Long Cao
    Li Song
    Nengzhi Jin
    Hong Zhang
    Journal of Molecular Modeling, 2023, 29
  • [29] Docking and molecular dynamics simulation of quinone compounds with trypanocidal activity
    de Molfetta, Fabio Alberto
    de Freitas, Renato Ferreira
    Ferreira da Silva, Alberico Borges
    Montanari, Carlos Alberto
    JOURNAL OF MOLECULAR MODELING, 2009, 15 (10) : 1175 - 1184
  • [30] Docking and molecular dynamics simulation of quinone compounds with trypanocidal activity
    Fábio Alberto de Molfetta
    Renato Ferreira de Freitas
    Albérico Borges Ferreira da Silva
    Carlos Alberto Montanari
    Journal of Molecular Modeling, 2009, 15 : 1175 - 1184