Molecular docking and dynamics analysis of halogenated imidazole chalcone as anticancer compounds

被引:4
|
作者
Haryadi, Winarto [1 ]
Pranowo, Harno Dwi [1 ]
机构
[1] Univ Gadjah Mada, Fac Math & Nat Sci, Dept Chem, Yogyakarta, Indonesia
关键词
imidazole-chalcone; anticancer; molecular docking; and molecular dynamics; SIMULATIONS;
D O I
10.3897/pharmacia.70.e101989
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Cancer is one of the three biggest causes of death in the world. The development of new drugs against this disease is a serious study that must be carried out in order to reduce mortality and extend the life span of sufferers. The aim of this research was to develop a new anti-cancer drug based on halogenated imidazole chalcones have been conducted. A 18 The halogenated imidazole chalcone compound was designed and performed molecular docking. Potential compounds of molecular docking are then carried out molecular dynamics. The results of molecular docking show that the potential chalcones based on bond affinity and specific interactions are chalcones B5, B6, C5, and C6. Analysis of the molecular dynamics result parameters are root mean standard deviation (RMSD) complex, root mean square fluctuation (RMSF), Radius of Gyration, Protein-ligand hydrogen bonding, and complex stability with generalized born surface area (GBSA) method, where the potential chalcone compounds are chalcones B5 and B6.
引用
收藏
页码:323 / 329
页数:7
相关论文
共 50 条
  • [1] Synthesis, anticancer activity, molecular docking and molecular dynamics studies of some pyrazole-chalcone hybrids
    Al Otaibi, Ahmed A. A.
    Alshammari, Sinad L. L.
    Alsukaibi, Abdulmohsen Khalaf Dhahi
    Jamal, Azfar
    Rajendrasozhan, Saravanan
    Alenezi, Khalaf M. M.
    Hussain, Afzal
    Khan, Imran
    Mushtaque, Md.
    Haque, Ashanul
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2024, 42 (03): : 1381 - 1391
  • [2] Design, Synthesis and Molecular Docking of Chalcone Derivatives as Potential Anticancer Agents
    Abosalim, Heba M.
    Nael, Manal A.
    El-Moselhy, Tarek F.
    CHEMISTRYSELECT, 2021, 6 (04): : 888 - 895
  • [3] Anthracenyl chalcone: a promising anticancer agent-structural and molecular docking studies
    Zainuri, Dian Alwani
    Hashim, Nurfatin Najihah Nor
    Affandi, Nurul Syuhada
    Jamsari, Nurfatiha Juliana
    Razak, Ibrahim Abdul
    EUROPEAN PHYSICAL JOURNAL B, 2024, 97 (11):
  • [4] TWO NOVEL COUMARIN COMPOUNDS: SYNTHESIS, IN VITRO ANTIBACTERIAL ANTICANCER, AND IN SILICO DOCKING AND MOLECULAR DYNAMICS
    Truc, Le Thi Thanh
    Tran, Nguyen Ngoc Huyen
    Thoi, Nguyen Van
    Hue, Nguyen Van
    Anh, Nguyen Thi Hong
    An, Tran Nguyen Minh
    QUIMICA NOVA, 2025, 48 (04):
  • [5] Network pharmacology, molecular docking and molecular dynamics simulation of chalcone scaffold-based compounds targeting breast cancer receptors
    Ismail, Noor Zafirah
    Khairuddean, Melati
    Abubakar, Sadiq
    Arsad, Hasni
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2025, 43 (07): : 3242 - 3257
  • [6] Design and Development of Halogenated Chalcone Derivatives as Potential Anticancer Agents
    Jain, Upendra K.
    Bhatia, Richa K.
    Rao, Akkinepally R.
    Singh, Ranjit
    Saxena, Ajit K.
    Sehar, Irum
    TROPICAL JOURNAL OF PHARMACEUTICAL RESEARCH, 2014, 13 (01) : 73 - 80
  • [7] Spectroscopic analysis and molecular docking of imidazole derivatives and investigation of its reactive properties by DFT and molecular dynamics simulations
    Thomas, Renjith
    Hossain, Mossaraf
    Mary, Y. Sheena
    Resmi, K. S.
    Armakovic, Stevan
    Armakovic, Sanja J.
    Nanda, Ashis Kumar
    Ranjan, Vivek Kumar
    Vijayakumar, G.
    Van Alsenoy, C.
    JOURNAL OF MOLECULAR STRUCTURE, 2018, 1158 : 156 - 175
  • [8] Structural, Spectral, Molecular Docking, and Molecular Dynamics Simulations of Phenylthiophene-2-Carboxylate Compounds as Potential Anticancer Agents
    Vennila, P.
    Al-Otaibi, Jamelah S.
    Venkatesh, G.
    Mary, Y. Sheena
    Raj, V.
    Acharjee, Nivedita
    Tamilselvi, P.
    POLYCYCLIC AROMATIC COMPOUNDS, 2024, 44 (01) : 238 - 260
  • [9] A Simple, Efficient Synthesis and Molecular Docking of Imidazole Derivatives as a Promising Anticancer Active Drugs
    Z. Sofia
    K. Nathalie
    Russian Journal of Organic Chemistry, 2023, 59 : S164 - S171
  • [10] Molecular insights into the antioxidant and anticancer properties: A comprehensive analysis through molecular modeling, docking, and dynamics studies
    Banu, Hamza Serina
    Parvin, Ismail sheriff
    Priyadharshini, Subramanian Deepika
    Gayathiri, Ekambaram
    Prakash, Palanisamy
    Pratheep, Thangaraj
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2024, 125 (10)