The pan-cancer landscape of glutamate and glutamine metabolism: A comprehensive bioinformatic analysis across 32 solid cancer types

被引:5
|
作者
Xue, Wenhua [1 ,2 ]
Wu, Kai [3 ]
Guo, Xiaona [2 ]
Chen, Chengxin [1 ,4 ]
Huang, Tao [2 ]
Li, Lifeng [4 ,5 ]
Liu, Bin [6 ]
Chang, Hao [7 ]
Zhao, Jie [1 ,4 ,8 ]
机构
[1] Zhengzhou Univ, Dept Pharm, Affiliated Hosp 1, Zhengzhou 450052, Peoples R China
[2] Huanghe Sci & Technol Univ, Med Sch, Zhengzhou 450052, Peoples R China
[3] Zhengzhou Univ, Dept Thorac Surg, Affiliated Hosp 1, Zhengzhou 450052, Peoples R China
[4] Zhengzhou Univ, Internet Med & Syst Applicat Natl Engn Lab, Affiliated Hosp 1, Zhengzhou 450052, Peoples R China
[5] Zhengzhou Univ, Affiliated Hosp 1, Canc Ctr, Zhengzhou 450052, Peoples R China
[6] Jiangsu Ocean Univ, Coll Pharm, Jiangsu Key Lab Marine Pharmaceut Cpd Screening, Lianyungang, Peoples R China
[7] Hanyu Biomed Ctr Beijing, Dept Canc Res, Beijing 102488, Peoples R China
[8] Zhengzhou Univ, Natl Engn Lab Internet Med Syst & Applicat, Affiliated Hosp 1, 1 East Jianshe Rd, Zhengzhou 450052, Peoples R China
来源
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE | 2024年 / 1870卷 / 02期
关键词
Glutamate and glutamine metabolism; Genetic alternations; Tumor microenvironment; Drug sensitivity; Prognosis; Molecular subtypes; ENRICHMENT; EXPRESSION; DISCOVERY;
D O I
10.1016/j.bbadis.2023.166982
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glutamine metabolism is a hallmark of cancer metabolism, which matters in the progression of the tumor. This synthetic study conducted a large-scale systematic analysis at the pan-cancer level on the glutamate and glutamine metabolism (GGM) across 32 solid tumors from the TCGA database. The glutamine metabolism activity was quantified through a scoring system. This study revealed that the GGM score in tumor tissues was up-regulated in 13 cancer types (BCLA, BRCA, COAD, KICH, KIRP, LUAD, LUSC, PAAD, PRAD, READ, STAD, THYM, UCEC) and down-regulated in 4 cancer types (CHOL, GBM, LIHC, THCA), exhibiting tissue specificity. The mRNA expression levels of glutamine metabolism-related genes were relatively high, and GLUL exhibited the highest expression level. The expression levels were up-regulated with copy number amplification. ALDH18A1, PYCR1, and PYCR2 show a significant upregulation in protein levels in cancer tissues compared to normal tissues, making them potential pan-cancer therapeutic targets. For the TME related to glutamine metabolism, the GGM score exhibited significant immune and stromal environment inhibitory effects in all involved tumors. Up-regulated GGM score indicated the widespread promotion of drug resistance at the pan-cancer level. GGM score and glutamine metabolism-related genes signature tended to be risk factors for the overall survival of cancer patients.
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页数:16
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