High-speed compressive wide-field fluorescence microscopy with an alternant deep denoisers-based image reconstruction algorithm

被引:2
|
作者
He, Yilin [1 ]
Yao, Yunhua [1 ]
He, Yu [1 ]
Huang, Zhengqi [1 ]
Ding, Pengpeng [1 ]
Qi, Dalong [1 ]
Wang, Zhiyong [2 ]
Jia, Tianqing [1 ]
Sun, Zhenrong [1 ]
Zhang, Shian [1 ,3 ,4 ]
机构
[1] East China Normal Univ, Sch Phys & Elect Sci, State Key Lab Precis Spect, Shanghai 200062, Peoples R China
[2] Univ Elect Sci & Technol China, Sch Math Sci, Chengdu 611731, Peoples R China
[3] Shanxi Univ, Collaborat Innovat Ctr Extreme Opt, Taiyuan 030006, Peoples R China
[4] Shandong Normal Univ, Collaborat Innovat Ctr Light Manipulat & Applicat, Jinan 250358, Peoples R China
关键词
Wide-field fluorescence microscopy; High-speed microscopy; Compressive imaging; Image reconstruction; Deep denoisers; TRACKING; CELLS;
D O I
10.1016/j.optlaseng.2023.107541
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
As an indispensable tool to observe the microcosmic structures and dynamics, wide-field fluorescence microscopy (WFM) has been widely applied in biological and medical areas, but the low imaging speed hinders its applications in high-speed fluorescent dynamics due to the limited frame rate of the camera. Here, we develop a high-speed compressive wide-field fluorescence microscopy (CWFM) to break the imaging speed limitation of conventional WFM. In our CWFM method, a coded aperture temporal compressive imaging technique is introduced into con-ventional WFM system to accelerate the imaging speed by reconstructing multiple images from every compressed image. An iterative algorithm with alternant deep denoisers of FFDnet and FastDVDnet is designed to reconstruct high-quality sequential images from every compressed image through spatial denoising and temporal constrain-ing. The high-speed imaging ability of CWFM is verified by measuring the movement of fluorescence beads on a slide, and an imaging speed of 2000 Hz is experimentally obtained with an ordinary CMOS camera of 200 Hz, the imaging speed is increased by an order of magnitude. Using our high-speed CWFM system, we successfully ob-serve the hydrodynamics by detecting the flow of fluorescence beads in the water across a corner of microchannel. This technique provides a well-established tool for detecting the high-speed fluid and biological dynamic scene, especially in microflow and cell tracking.
引用
收藏
页数:7
相关论文
共 50 条
  • [41] Assessing mitochondrial morphology and dynamics using fluorescence wide-field microscopy and 3D image processing
    Song, Wenjun
    Bossy, Blaise
    Martin, Ola J.
    Hicks, Andrew
    Lubitz, Sarah
    Knott, Andrew B.
    Bossy-Wetzel, Ella
    METHODS, 2008, 46 (04) : 295 - 303
  • [42] Compressive sensing based high-speed time-stretch optical microscopy for two-dimensional image acquisition
    Guo, Qiang
    Chen, Hongwei
    Weng, Zhiliang
    Chen, Minghua
    Yang, Sigang
    Xie, Shizhong
    OPTICS EXPRESS, 2015, 23 (23): : 29639 - 29646
  • [43] High-speed image-reconstruction algorithm for a spatially multiplexed image and application to digital holography
    Tahara, Tatsuki
    Gotohda, Takuya
    Akamatsu, Takanori
    Arai, Yasuhiko
    Shimobaba, Tomoyoshi
    Ito, Tomoyoshi
    Kakue, Takashi
    OPTICS LETTERS, 2018, 43 (12) : 2937 - 2940
  • [44] A 3-D Deconvolution Based Particle Detection Method for Wide-field Microscopy Image
    Zhao, Jing
    Li, Yang
    Du, Sidan
    2014 8TH INTERNATIONAL SYMPOSIUM ON MEDICAL INFORMATION AND COMMUNICATION TECHNOLOGY (ISMICT), 2014,
  • [45] High-resolution, wide-field object reconstruction with synthetic aperture Fourier holographic optical microscopy
    Hillman, Timothy R.
    Gutzler, Thomas
    Alexandrov, Sergey A.
    Sampson, David D.
    OPTICS EXPRESS, 2009, 17 (10): : 7873 - 7892
  • [46] Image Formation in Wide-Field Microscopes Based on Leakage of Surface Plasmon-Coupled Fluorescence
    Frisbie, S. P.
    Chesnutt, C. F.
    Holtz, M. E.
    Krishnan, A.
    de Peralta, L. Grave
    Bernussi, A. A.
    IEEE PHOTONICS JOURNAL, 2009, 1 (02): : 153 - 162
  • [47] Slicing Network for Wide-Field Fluorescence Image Based on the Improved U-Net Model
    Yao, Shiqing
    Guan, Meiling
    Ren, Wei
    Xi, Peng
    Li, Meiqi
    Sun, Mingjian
    MICROSCOPY RESEARCH AND TECHNIQUE, 2025, 88 (03) : 678 - 685
  • [48] Compact wide-field femtoliter-chamber imaging system for high-speed and accurate digital bioanalysis
    Iida, Tatsuya
    Ando, Jun
    Shinoda, Hajime
    Makino, Asami
    Yoshimura, Mami
    Murai, Kazue
    Mori, Makiko
    Takeuchi, Hiroaki
    Noda, Takeshi
    Nishimasu, Hiroshi
    Watanabe, Rikiya
    Lab on a Chip, 2022, 23 (04) : 684 - 691
  • [49] CHIMERA: a wide-field, multi-colour, high-speed photometer at the prime focus of the Hale telescope
    Harding, L. K.
    Hallinan, G.
    Milburn, J.
    Gardner, P.
    Konidaris, N.
    Singh, N.
    Shao, M.
    Sandhu, J.
    Kyne, G.
    Schlichting, H. E.
    MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, 2016, 457 (03) : 3036 - 3049
  • [50] Compact wide-field femtoliter-chamber imaging system for high-speed and accurate digital bioanalysis
    Iida, Tatsuya
    Ando, Jun
    Shinoda, Hajime
    Makino, Asami
    Yoshimura, Mami
    Murai, Kazue
    Mori, Makiko
    Takeuchi, Hiroaki
    Noda, Takeshi
    Nishimasu, Hiroshi
    Watanabe, Rikiya
    LAB ON A CHIP, 2023, 23 (04) : 684 - 691