Using deep learning to accelerate magnetic resonance measurements of molecular exchange

被引:1
|
作者
Cheng, Zhaowei [1 ]
Hu, Songtao [2 ]
Han, Guangxu [2 ]
Fang, Ke [1 ]
Jin, Xinyu [1 ]
Ordinola, Alfredo [3 ]
Ozarslan, Evren [3 ]
Bai, Ruiliang [2 ,4 ,5 ]
机构
[1] Zhejiang Univ, Coll Informat Sci & Elect Engn, Hangzhou, Peoples R China
[2] Zhejiang Univ, Coll Biomed Engn & Instrument Sci, Key Lab Biomed Engn,Educ Minist, Hangzhou, Peoples R China
[3] Linkoping Univ, Dept Biomed Engn, Linkoping, Sweden
[4] Zhejiang Univ, Interdisciplinary Inst Neurosci & Technol, Sch Med, Hangzhou, Peoples R China
[5] Zhejiang Univ, MOE Frontier Sci Ctr Brain Sci & Brain Machine Int, Liangzhu Lab, State Key Lab Brain Machine Intelligence, 1369 West Wenyi Rd, Hangzhou 311121, Peoples R China
来源
JOURNAL OF CHEMICAL PHYSICS | 2023年 / 159卷 / 05期
基金
中国国家自然科学基金;
关键词
ULTRAFAST 2D NMR; DIFFUSION; MODEL; APOPTOSIS; DYNAMICS; NECROSIS;
D O I
10.1063/5.0159343
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Real-time monitoring and quantitative measurement of molecular exchange between different microdomains are useful to characterize the local dynamics in porous media and biomedical applications of magnetic resonance. Diffusion exchange spectroscopy (DEXSY) is a noninvasive technique for such measurements. However, its application is largely limited by the involved long acquisition time and complex parameter estimation. In this study, we introduce a physics-guided deep neural network that accelerates DEXSY acquisition in a data-driven manner. The proposed method combines sampling pattern optimization and physical parameter estimation into a unified framework. Comprehensive simulations and experiments based on a two-site exchange system are conducted to demonstrate this new sampling optimization method in terms of accuracy, repeatability, and efficiency. This general framework can be adapted for other molecular exchange magnetic resonance measurements.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Polarization Measurements with Deep Learning Analysis of Nuclear Magnetic Resonance
    Seay, Devin
    Fernando, Ishara P.
    Keller, Dustin
    19TH WORKSHOP ON POLARIZED SOURCES, TARGETS AND POLARIMETRY, 2023,
  • [2] Magnetic Resonance Spectroscopy Quantification Using Deep Learning
    Hatami, Nima
    Sdika, Michael
    Ratiney, Helene
    MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2018, PT I, 2018, 11070 : 467 - 475
  • [3] Quantitative molecular imaging using deep magnetic resonance fingerprinting
    Vladimirov, Nikita
    Cohen, Ouri
    Heo, Hye-Young
    Zaiss, Moritz
    Farrar, Christian T.
    Perlman, Or
    NATURE PROTOCOLS, 2025,
  • [4] Improving Quantitative Magnetic Resonance Imaging Using Deep Learning
    Liu, Fang
    SEMINARS IN MUSCULOSKELETAL RADIOLOGY, 2020, 24 (04) : 451 - 459
  • [5] Magnetic Resonance Spectroscopy Spectral Registration Using Deep Learning
    Ma, David J. J.
    Yang, Yanting
    Harguindeguy, Natalia
    Tian, Ye
    Small, Scott A.
    Liu, Feng
    Rothman, Douglas L.
    Guo, Jia
    JOURNAL OF MAGNETIC RESONANCE IMAGING, 2024, 59 (03) : 964 - 975
  • [6] Deep Reinforcement Learning for Molecular Inverse Problem of Nuclear Magnetic Resonance Spectra to Molecular Structure
    Sridharan, Bhuvanesh
    Mehta, Sarvesh
    Pathak, Yashaswi
    Priyakumar, U. Deva
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2022, 13 (22): : 4924 - 4933
  • [7] Changing the Contrast of Magnetic Resonance Imaging Signals using Deep Learning
    Simko, Attila
    Lofstedt, Tommy
    Garpebring, Anders
    Bylund, Mikael
    Nyholm, Tufve
    Jonsson, Joakim
    MEDICAL IMAGING WITH DEEP LEARNING, VOL 143, 2021, 143 : 713 - 727
  • [8] Detection and Prediction of Schizophrenia Using Magnetic Resonance Images and Deep Learning
    Srivathsan, S.
    Sreenithi, B.
    Naren, J.
    COGNITIVE INFORMATICS AND SOFT COMPUTING, 2020, 1040 : 97 - 105
  • [9] Deep Learning for Brain Tumor Segmentation using Magnetic Resonance Images
    Gupta, Surbhi
    Gupta, Manoj
    2021 IEEE CONFERENCE ON COMPUTATIONAL INTELLIGENCE IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY (CIBCB), 2021, : 97 - 102
  • [10] Spine Magnetic Resonance Image Segmentation Using Deep Learning Techniques
    Andrew, J.
    DivyaVarshini, Murathoti
    Barjo, Prerna
    Tigga, Irene
    2020 6TH INTERNATIONAL CONFERENCE ON ADVANCED COMPUTING AND COMMUNICATION SYSTEMS (ICACCS), 2020, : 945 - 950