Application of next generation sequencing in cardiology: current and future precision medicine implications

被引:5
|
作者
Papadopoulou, Eirini [1 ]
Bouzarelou, Dimitra [1 ]
Tsaousis, George [1 ]
Papathanasiou, Athanasios [1 ]
Vogiatzi, Georgia [2 ]
Vlachopoulos, Charalambos [3 ]
Miliou, Antigoni [3 ]
Papachristou, Panagiota [4 ]
Prappa, Efstathia [5 ]
Servos, Georgios [6 ]
Ritsatos, Konstantinos [7 ]
Seretis, Aristeidis [7 ]
Frogoudaki, Alexandra [8 ]
Nasioulas, George [1 ]
机构
[1] Genekor Med SA, Athens, Greece
[2] Sotiria Hosp, Dept Cardiol 3, Athens, Greece
[3] Natl & Kapodistrian Univ Athens, Dept Cardiol 1, Unit Inherited Cardiac Condit & Sports Cardiol, Athens, Greece
[4] PA Kyriakou Childrens Hosp, Cardiol Dept, Athens, Greece
[5] Evangelismos Gen Hosp Athens, Dept Cardiol 2, Arrhythmia Unit, Athens, Greece
[6] PA Kyriakou Childrens Hosp, Pediat Cardiol Unit, Athens, Greece
[7] Onassis Cardiac Surg Ctr, Unit Inherited & Rare Cardiovasc Dis, Athens, Greece
[8] Natl & Kapodistrian Univ Athens, Attikon Univ Hosp, Sch Med, Dept Cardiol 2, Athens, Greece
来源
关键词
next generation sequencing; personalized treatment; genetic analysis; cardiovascular diseases; cardiogenetics; EXPERT CONSENSUS STATEMENT; SUDDEN CARDIAC DEATH; THORACIC AORTIC-ANEURYSMS; SHORT QT SYNDROME; CARDIOVASCULAR-DISEASE; ARRHYTHMOGENIC CARDIOMYOPATHY; DIAGNOSTIC YIELD; GENETICS; VARIANTS; MUTATION;
D O I
10.3389/fcvm.2023.1202381
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Inherited cardiovascular diseases are highly heterogeneous conditions with multiple genetic loci involved. The application of advanced molecular tools, such as Next Generation Sequencing, has facilitated the genetic analysis of these disorders. Accurate analysis and variant identification are required to maximize the quality of the sequencing data. Therefore, the application of NGS for clinical purposes should be limited to laboratories with a high level of technological expertise and resources. In addition, appropriate gene selection and variant interpretation can result in the highest possible diagnostic yield. Implementation of genetics in cardiology is imperative for the accurate diagnosis, prognosis and management of several inherited disorders and could eventually lead to the realization of precision medicine in this field. However, genetic testing should also be accompanied by an appropriate genetic counseling procedure that clarifies the significance of the genetic analysis results for the proband and his family. In this regard, a multidisciplinary collaboration among physicians, geneticists, and bioinformaticians is imperative. In the present review, we address the current state of knowledge regarding genetic analysis strategies employed in the field of cardiogenetics. Variant interpretation and reporting guidelines are explored. Additionally, gene selection procedures are accessed, with a particular emphasis on information concerning gene-disease associations collected from international alliances such as the Gene Curation Coalition (GenCC). In this context, a novel approach to gene categorization is proposed. Moreover, a sub-analysis is conducted on the 1,502,769 variation records with submitted interpretations in the Clinical Variation (ClinVar) database, focusing on cardiology-related genes. Finally, the most recent information on genetic analysis's clinical utility is reviewed.
引用
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页数:21
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