Characterization of heavy-chain antibody gene repertoires in Bactrian camels

被引:6
|
作者
Liu, Yuexing [1 ]
Yi, Li [2 ]
Li, Yixue [3 ,4 ,5 ,6 ,7 ,8 ]
Wang, Zhen [1 ]
Jirimutu [2 ]
机构
[1] Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, CAS Key Lab Computat Biol, Shanghai 200031, Peoples R China
[2] Inner Mongolia Agr Univ, Coll Food Sci & Engn, Key Lab Dairy Biotechnol & Engn, Minist Educ, Hohhot 010018, Inner Mongolia, Peoples R China
[3] Univ Chinese Acad Sci, Hangzhou Inst Adv Study, Hangzhou 310024, Zhejiang, Peoples R China
[4] Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, Shanghai 200240, Peoples R China
[5] Guangzhou Lab, Guangzhou 510005, Guangdong, Peoples R China
[6] Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth, Biomed Big Data Ctr, Shanghai 200031, Peoples R China
[7] Fudan Univ, Collaborat Innovat Ctr Genet & Dev, Shanghai 200433, Peoples R China
[8] Inner Mongolia Inst Camel Res, West Alax 737399, Inner Mongolia, Peoples R China
基金
中国国家自然科学基金;
关键词
Bactrian camel; Heavy -chain antibody; Nanobody; Immune repertoire diversity; Non -canonical cysteine; V-H; VARIABLE DOMAIN; IMMUNOGLOBULIN; NANOBODIES; EVOLUTION; SEQUENCE; REGIONS; VHH;
D O I
10.1016/j.jgg.2022.04.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Camelids are the only mammals that can produce functional heavy-chain antibodies (HCAbs). Although HCAbs were discovered over 30 years ago, the antibody gene repertoire of Bactrian camels remains largely underexplored. To characterize the diversity of variable genes of HCAbs (VHHs), germline and rearranged VHH repertoires are constructed. Phylogenetics analysis shows that all camelid VHH genes are derived from a common ancestor and the nucleotide diversity of VHHs is similar across all camelid species. While species-specific hallmark sites are identified, the non-canonical cysteines specific to VHHs are distinct in Bactrian camels and dromedaries compared with alpacas. Though low divergence at the germline repertoire between wild and domestic Bactrian camels, higher expression of VHHs is observed in some wild Bactrian camels than that of domestic ones. This study not only adds our understanding of VHH repertoire diversity across camelids, but also provides useful resources for HCAb engineering.Copyright (c) 2022, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and Genetics Society of China. Published by Elsevier Limited and Science Press. All rights reserved.
引用
收藏
页码:38 / 45
页数:8
相关论文
共 50 条
  • [11] Dynamics of heavy chain junctional length biases in antibody repertoires
    Sankar, Kannan
    Hoi, Kam Hon
    Hotzel, Isidro
    COMMUNICATIONS BIOLOGY, 2020, 3 (01)
  • [12] Dynamics of heavy chain junctional length biases in antibody repertoires
    Kannan Sankar
    Kam Hon Hoi
    Isidro Hötzel
    Communications Biology, 3
  • [13] HOMOLOGOUS RECOMBINATION IN HYBRIDOMA CELLS - HEAVY-CHAIN CHIMERIC ANTIBODY PRODUCED BY GENE TARGETING
    FELL, HP
    YARNOLD, S
    HELLSTROM, I
    HELLSTROM, KE
    FOLGER, KR
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (21) : 8507 - 8511
  • [14] Regulation of immunoglobulin heavy-chain gene rearrangements
    Chowdhury, D
    Sen, R
    IMMUNOLOGICAL REVIEWS, 2004, 200 : 182 - 196
  • [15] CLONING, CHARACTERIZATION, EXPRESSION, AND CHROMOSOMAL LOCALIZATION OF A HUMAN FERRITIN HEAVY-CHAIN GENE
    HENTZE, MW
    KEIM, S
    PAPADOPOULOS, P
    OBRIEN, S
    MODI, W
    DRYSDALE, J
    LEONARD, WJ
    HARFORD, JB
    KLAUSNER, RD
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (19) : 7226 - 7230
  • [16] CHARACTERIZATION OF A SMOOTH-MUSCLE SPECIFIC MYOSIN HEAVY-CHAIN GENE PROMOTER
    KATOH, Y
    LOUKIANOV, E
    KOPRAS, E
    ZILBERMAN, A
    PERIASAMY, M
    CIRCULATION, 1994, 90 (04) : 625 - 625
  • [17] ISOLATION AND CHARACTERIZATION OF THE COMPLETE HUMAN BETA-MYOSIN HEAVY-CHAIN GENE
    DIEDERICH, KW
    EISELE, I
    RIED, T
    JAENICKE, T
    LICHTER, P
    VOSBERG, HP
    HUMAN GENETICS, 1989, 81 (03) : 214 - 220
  • [18] CHARACTERIZATION OF DICTYOSTELIUM MYOSIN HEAVY-CHAIN KINASE
    KUCZMARSKI, ER
    SPUDICH, JA
    JOURNAL OF CELL BIOLOGY, 1982, 95 (02): : A296 - A296
  • [19] CHARACTERIZATION OF SARCOMERIC MYOSIN HEAVY-CHAIN GENES
    WYDRO, RM
    NGUYEN, HT
    GUBITS, RM
    NADALGINARD, B
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1983, 258 (01) : 670 - 678
  • [20] Articular, monoclonal γ3 heavy-chain deposition disease -: Characterization of a partially deleted heavy-chain gene and its protein product synthesized in vivo and in vitro
    Thompson, KM
    Sletten, K
    Brandtzaeg, P
    Källberg, E
    Wien, TN
    Husby, G
    ARTHRITIS AND RHEUMATISM, 2003, 48 (11): : 3266 - 3271