Automated machine learning-based prediction of the progression of knee pain, functional decline, and incidence of knee osteoarthritis in individuals at high risk of knee osteoarthritis: Data from the osteoarthritis initiative study
被引:2
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作者:
Chen, Tianrong
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机构:
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R ChinaUniv Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Chen, Tianrong
[1
]
Or, Calvin Kalun
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机构:
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Room 8-7,8-F,Haking Wong Bldg, Hong Kong, Peoples R ChinaUniv Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Or, Calvin Kalun
[1
,2
]
机构:
[1] Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
[2] Univ Hong Kong, Dept Ind & Mfg Syst Engn, Room 8-7,8-F,Haking Wong Bldg, Hong Kong, Peoples R China
ObjectiveThis study aimed to examine the performance of machine learning models in predicting the progression of knee pain, functional decline, and incidence of knee osteoarthritis (OA) in high-risk individuals, with automated machine learning (AutoML) being used to automate the prediction process.DesignThere were four stages in the process of our AutoML-integrated prediction. Stage 1-Data preparation: The data of 3200 eligible individuals in the Osteoarthritis Initiative (OAI) study who were considered at high risk of knee OA at the baseline visit were extracted and used. Specifically, 1094 variables from the OAI study were used to predict the changes in knee pain, physical function, and incidence of knee OA (i.e. the first occurrence of frequent knee symptoms and definite tibial osteophytes (Kellgren and Lawrence grade >= 2)) over a 9-year period. Stage 2-Model training: The AutoML approach was used to automatically train nine widely used machine learning (ML) models. Stage 3-Model testing: The AutoML approach was used to automatically test the performance of the ML models. Stage 4-Selection of important input variables: The AutoML approach automated the process of computing the importance scores of all input variables and identifying the most important ones, using the technique of permutation feature importance.ResultsUsing the AutoML approach, the weighted ensemble model and the CatBoost model showed the best performance among all nine ML models. For the prediction of each outcome in each year, the five most important input variables were identified, most of which were obtained from self-reported questionnaire surveys and radiographic imaging reports.ConclusionThe AutoML approach has shown potential in automating the process of using ML models to predict long-term changes in knee OA-related outcomes. Its use could support the deployment of ML solutions, facilitating the provision of personalized interventions to prevent the deterioration of knee health and incident knee OA.
机构:
Univ Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Oulu Univ Hosp, Dept Diagnost Radiol, Oulu, FinlandUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Tiulpin, Aleksei
Klein, Stefan
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机构:
Erasmus MC, Univ Med Ctr Rotterdam, Depts Med Informat, Biomed Imaging Grp Rotterdam, Rotterdam, Netherlands
Erasmus MC, Univ Med Ctr Rotterdam, Depts Radiol, Biomed Imaging Grp Rotterdam, Rotterdam, NetherlandsUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Klein, Stefan
Bierma-Zeinstra, Sita M. A.
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Erasmus MC, Univ Med Ctr Rotterdam, Dept Gen Practice, Rotterdam, Netherlands
Erasmus MC, Univ Med Ctr Rotterdam, Dept Orthoped, Rotterdam, NetherlandsUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Bierma-Zeinstra, Sita M. A.
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Thevenot, Jerome
Rahtu, Esa
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Tampere Univ Technol, Dept Signal Proc, Tampere, FinlandUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Rahtu, Esa
van Meurs, Joyce
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h-index: 0
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Erasmus MC, Univ Med Ctr Rotterdam, Dept Internal Med, Rotterdam, NetherlandsUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
van Meurs, Joyce
Oei, Edwin H. G.
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机构:
Univ Med Ctr Rotterdam, Dept Radiol & Nucl Med, Rotterdam, NetherlandsUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Oei, Edwin H. G.
Saarakkala, Simo
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Univ Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
Oulu Univ Hosp, Dept Diagnost Radiol, Oulu, FinlandUniv Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
机构:
Boston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Univ Manchester, Manchester, Lancs, EnglandBoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Felson, David T.
Niu, Jingbo
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机构:Boston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Niu, Jingbo
Gross, K. Douglas
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h-index: 0
机构:
MGH Inst Hlth Profess, Boston, MA USABoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Gross, K. Douglas
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Englund, Martin
Sharma, Leena
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Northwestern Univ, Feinberg Sch Med, Chicago, IL 60611 USABoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Sharma, Leena
Cooke, T. Derek V.
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机构:
Queens Univ, Kingston, ON, CanadaBoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Cooke, T. Derek V.
Guermazi, Ali
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h-index: 0
机构:Boston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Guermazi, Ali
Roemer, Frank W.
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机构:Boston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Roemer, Frank W.
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Segal, Neil
Goggins, Joyce M.
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机构:Boston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Goggins, Joyce M.
Lewis, C. Elizabeth
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机构:
Univ Alabama Birmingham, Birmingham, AL USABoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Lewis, C. Elizabeth
Eaton, Charles
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机构:
Brown Univ, Providence, RI 02912 USABoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Eaton, Charles
Nevitt, Michael C.
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机构:
Univ Calif San Francisco, San Francisco, CA 94143 USABoston Univ, Sch Med, Clin Epidemiol Res & Training Unit, Boston, MA 02118 USA
Nevitt, Michael C.
ARTHRITIS AND RHEUMATISM,
2013,
65
(02):
: 355
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362
机构:
NYU, Courant Inst Math Sci, New York, NY USANYU, Courant Inst Math Sci, New York, NY USA
Leung, Kevin
Zhang, Bofei
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h-index: 0
机构:
NYU, Ctr Data Sci, New York, NY USANYU, Courant Inst Math Sci, New York, NY USA
Zhang, Bofei
Tan, Jimin
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NYU, Ctr Data Sci, New York, NY USANYU, Courant Inst Math Sci, New York, NY USA
Tan, Jimin
Shen, Yiqiu
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NYU, Ctr Data Sci, New York, NY USANYU, Courant Inst Math Sci, New York, NY USA
Shen, Yiqiu
Geras, Krzysztof J.
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机构:
NYU, Ctr Data Sci, New York, NY USA
NYU Langone Hlth, Bernard & Irene Schwartz Ctr Biomed Imaging, 660 1st Ave, New York, NY 10016 USA
NYU Langone Hlth, Dept Radiol, 660 1st Ave, New York, NY 10016 USANYU, Courant Inst Math Sci, New York, NY USA
Geras, Krzysztof J.
Babb, James S.
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NYU Langone Hlth, Bernard & Irene Schwartz Ctr Biomed Imaging, 660 1st Ave, New York, NY 10016 USA
NYU Langone Hlth, Dept Radiol, 660 1st Ave, New York, NY 10016 USANYU, Courant Inst Math Sci, New York, NY USA
Babb, James S.
Cho, Kyunghyun
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NYU, Courant Inst Math Sci, New York, NY USA
NYU, Ctr Data Sci, New York, NY USANYU, Courant Inst Math Sci, New York, NY USA
Cho, Kyunghyun
Chang, Gregory
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NYU Langone Hlth, Dept Radiol, 660 1st Ave, New York, NY 10016 USANYU, Courant Inst Math Sci, New York, NY USA
Chang, Gregory
Deniz, Cem M.
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NYU Langone Hlth, Bernard & Irene Schwartz Ctr Biomed Imaging, 660 1st Ave, New York, NY 10016 USA
NYU Langone Hlth, Dept Radiol, 660 1st Ave, New York, NY 10016 USANYU, Courant Inst Math Sci, New York, NY USA
机构:
Baylor Coll Med, Dept Med, Houston, TX 77030 USA
Michael E DeBakey Med Ctr, Houston VA HSR&D Ctr Innovat Qual Effectiveness &, Med Care Line & Res Care Line, Houston, TX USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Lo, Grace H.
Schneider, Erika
论文数: 0引用数: 0
h-index: 0
机构:
Cleveland Clin Fdn, Imaging Inst, 9500 Euclid Ave, Cleveland, OH 44195 USA
SciTrials LCC, Rocky River, OH USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Schneider, Erika
Driban, Jeffrey B.
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h-index: 0
机构:
Tufts Med Ctr, Div Rheumatol, Boston, MA USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Driban, Jeffrey B.
Price, Lori Lyn
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h-index: 0
机构:
Tufts Med Ctr, Inst Clin Res & Hlth Policy Studies, Boston, MA USA
Tufts Univ, Tufts Clin & Translat Sci Inst, Boston, MA 02111 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Price, Lori Lyn
Hunter, David J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Sydney, Royal North Shore Hosp, Sydney, NSW, Australia
Univ Sydney, Inst Bone & Joint Res, Kolling Inst, Sydney, NSW, AustraliaBaylor Coll Med, Dept Med, Houston, TX 77030 USA
Hunter, David J.
Eaton, Charles B.
论文数: 0引用数: 0
h-index: 0
机构:
Brown Univ, Dept Family Med, Warren Alpert Med Sch, Providence, RI 02912 USA
Brown Univ, Sch Publ Hlth, Dept Epidemiol, Providence, RI 02912 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
机构:
Harvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USA
Lu, Bing
Driban, Jeffrey
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h-index: 0
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Tufts Med Ctr, Boston, MA USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USA
Driban, Jeffrey
Xu, Chang
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h-index: 0
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Rutgers State Univ, Stat, New Brunswick, NJ USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USA
Xu, Chang
McAlindon, Timothy E.
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Tufts Med Ctr, Div Rheumatol, Boston, MA USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USA
McAlindon, Timothy E.
Eaton, Charles B.
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h-index: 0
机构:
Brown Univ, Alpert Med Sch, Family Med & Community Hlth Epidemiol, Pawtucket, RI USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Immunol & Allergy, Boston, MA USA
机构:
Brigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Boston, MA 02115 USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Xu, C.
Roberts, M.
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Brown Univ, Alpert Med Sch, Ctr Primary Care & Prevent, Pawtucket, RI USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Roberts, M.
Driban, J.
论文数: 0引用数: 0
h-index: 0
机构:
Tufts Med Ctr, Div Rheumatol, Boston, MA 02111 USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Driban, J.
McAlindon, T.
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h-index: 0
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Tufts Med Ctr, Div Rheumatol, Boston, MA 02111 USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
McAlindon, T.
Eaton, C.
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h-index: 0
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Brown Univ, Alpert Med Sch, Ctr Primary Care & Prevent, Pawtucket, RI USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Eaton, C.
Lu, B.
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h-index: 0
机构:
Brigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Boston, MA 02115 USABrigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA