Intramolecular interactions (O-H•••O, C-H•••N, N-H•••π) in isomers of neutral, cation, and anion dopamine molecules: A DFT study on the influence of solvents (water and ethanol)

被引:1
|
作者
Sangeetha, Thekkayil [1 ]
Lakshmipathi, Senthilkumar [1 ]
机构
[1] Bharathiar Univ, Dept Phys, Coimbatore 641016, Tamil Nadu, India
关键词
Intramolecular interactions; Isomers; Anion dopamine; HYDROGEN-BONDS; ELECTRIC-FIELDS; ENERGY; ACID; GAS; AIM; CONFORMATION; MODEL; BETA;
D O I
10.1007/s00894-023-05466-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ContextDopamine (DA) is one of the most important neurotransmitters associated with numerous neural disorders. This investigation reports the intramolecular interactions present in the isomers of neutral (DA(0)), anionic (DA(-)), and cationic (DA(+)) dopamine isomers in gas, water, and ethanol mediums. Neutral and anion isomers have O-H center dot center dot center dot O, C-H center dot center dot center dot N intramolecular hydrogen bonds and N-H center dot center dot center dot pi interactions. All the interactions are electrostatic in nature. Isomers of cation dopamine show no intramolecular interactions in the solvent. Natural charges from natural bond orbital (NBO) analysis show that O-H center dot center dot center dot O bonds and the N-H center dot center dot center dot pi interactions are the most and least polar, respectively. H-1 NMR study reveals the inverse linear correlation between shielding constant and electron density in a solvent medium. HOMO-LUMO energy gap indicates higher stability for neutral and cationic forms of dopamine isomers in water and ethanol medium.MethodsWe have optimized all the structural forms of dopamine molecule using the Becke three hybrid exchange and Lee-Yang-Parr correlation functional with Grimme's dispersion correction, B3LYP-D3(BJ), and aug-cc-pVTZ basis set using the Gaussian16 software. Vibrational frequency analysis with no imaginary frequencies confirms the nature of global minima. The solvent studies (water and ethanol) were carried out using the SCRF keyword and the polarisable continuum model (PCM) of Miertus and Tomasi. NBO analysis and NMR studies were also performed for all conformers. Topology analysis was explored using the software Multiwfn.
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页数:10
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