Identification and validation of SOCS1/2/3/4 as potential prognostic biomarkers and correlate with immune infiltration in glioblastoma

被引:4
|
作者
Dai, Lirui [1 ,2 ,3 ]
Han, Yongjie [1 ,3 ]
Yang, Zhuo [1 ,3 ]
Zeng, Yuling [4 ]
Liang, Wulong [1 ,3 ]
Shi, Zimin [1 ,2 ,3 ]
Tao, Yiran [1 ,2 ,3 ]
Liang, Xianyin [1 ,2 ,3 ]
Liu, Wanqing [1 ,2 ,3 ]
Zhou, Shaolong [1 ,3 ]
Xing, Zhe [1 ,2 ,3 ]
Hu, Weihua [1 ,3 ]
Wang, Xinjun [1 ,2 ,3 ,5 ]
机构
[1] Zhengzhou Univ, Affiliated Hosp 5, Dept Neurosurg, Zhengzhou, Peoples R China
[2] Zhengzhou Univ, Inst Neurosci, Zhengzhou, Peoples R China
[3] Henan Int Joint Lab Glioma Metab & Microenvironm R, Zhengzhou, Peoples R China
[4] Zhengzhou Univ, Dept Blood Transfus, Affiliated Hosp 5, Zhengzhou, Peoples R China
[5] Zhengzhou Univ, Affiliated Hosp 5, Dept Neurosurg, Zhengzhou 450052, Peoples R China
基金
中国国家自然科学基金;
关键词
biomarkers; gene expression profiling; glioblastoma; immune infiltration; JAK; STAT3; SOCS1; 2; 3; 4; GENE-EXPRESSION; CANCER; PROLIFERATION; SURVIVAL; REVEALS; SERVER;
D O I
10.1111/jcmm.17807
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Suppressor of cytokine signalling (SOCS) 1/2/3/4 are involved in the occurrence and progression of multiple malignancies; however, their prognostic and developmental value in patients with glioblastoma (GBM) remains unclear. The present study used TCGA, ONCOMINE, SangerBox3.0, UALCAN, TIMER2.0, GENEMANIA, TISDB, The Human Protein Atlas (HPA) and other databases to analyse the expression profile, clinical value and prognosis of SOCS1/2/3/4 in GBM, and to explore the potential development mechanism of action of SOCS1/2/3/4 in GBM. The majority of analyses showed that SOCS1/2/3/4 transcription and translation levels in GBM tissues were significantly higher than those in normal tissues. qRT-PCR, western blotting (WB) and immunohistochemical staining were used to verify that SOCS3 was expressed at higher mRNA and protein levels in GBM than in normal tissues or cells. High SOCS1/2/3/4 mRNA expression was associated with poor prognosis in patients with GBM, especially SOCS3. SOCS1/2/3/4 were highly contraindicated, which had few mutations, and were not associated with clinical prognosis. Furthermore, SOCS1/2/3/4 were associated with the infiltration of specific immune cell types. In addition, SOCS3 may affect the prognosis of patients with GBM through JAK/STAT signalling pathway. Analysis of the GBM-specific protein interaction (PPI) network showed that SOCS1/2/3/4 were involved in multiple potential carcinogenic mechanisms of GBM. In addition, colony formation, Transwell, wound healing and western blotting assays revealed that inhibition of SOCS3 decreased the proliferation, migration and invasion of GBM cells. In conclusion, the present study elucidated the expression profile and prognostic value of SOCS1/2/3/4 in GBM, which may provide potential prognostic biomarkers and therapeutic targets for GBM, especially SOCS3.
引用
收藏
页码:2194 / 2214
页数:21
相关论文
共 50 条
  • [21] CDK1, CCNB1, and CCNB2 are Prognostic Biomarkers and Correlated with Immune Infiltration in Hepatocellular Carcinoma
    Zou, Yiping
    Ruan, Shiye
    Jin, Liang
    Chen, Zhihong
    Han, Hongwei
    Zhang, Yuanpeng
    Jian, Zhixiang
    Lin, Ye
    Shi, Ning
    Jin, Haosheng
    MEDICAL SCIENCE MONITOR, 2020, 26
  • [22] Angiogenesis regulators S100A4, SPARC and SPP1 correlate with macrophage infiltration and are prognostic biomarkers in colon and rectal cancers
    Kazakova, Elena
    Rakina, Militsa
    Sudarskikh, Tatiana
    Iamshchikov, Pavel
    Tarasova, Anna
    Tashireva, Liubov
    Afanasiev, Sergei
    Dobrodeev, Alexei
    Zhuikova, Lilia
    Cherdyntseva, Nadezhda
    Kzhyshkowska, Julia
    Larionova, Irina
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [23] Identification of RUNX1 and IFNGR2 as prognostic-related biomarkers correlated with immune infiltration and subtype differentiation of low-grade glioma
    Zhang, Xia
    Chu, Hongyu
    Cheng, Yuan
    Ren, Jie
    Wang, Wei
    Liu, Xicheng
    Yan, Xiaodong
    BIOMOLECULES AND BIOMEDICINE, 2023, 23 (03): : 405 - 425
  • [24] Comprehensive Analysis and Experimental Validation of TLL2 as a Potential New Prognostic Biomarker Associated with Immune Infiltration in Lung Adenocarcinoma
    Jiang, Jing
    Du, Zhongye
    Tang, Haijuan
    Huang, Yingying
    Li, Dongbing
    Liang, Qiuli
    RECENT PATENTS ON ANTI-CANCER DRUG DISCOVERY, 2024,
  • [25] Deoxyribonuclease 1-like 3 may be a potential prognostic biomarker associated with immune infiltration in colon cancer
    Liu, Jing
    Yi, Jingya
    Zhang, Zhihong
    Cao, Donglin
    Li, Lei
    Yao, Yachao
    AGING-US, 2021, 13 (12): : 16513 - 16526
  • [26] Identification and verification of IGFBP3 and YTHDC1 as biomarkers associated with immune infiltration and mitophagy in hypertrophic cardiomyopathy
    Li, Yao
    Zhang, Wei
    Dai, Yan
    Chen, Keping
    FRONTIERS IN GENETICS, 2022, 13
  • [27] Bioinformatic Analysis and Experimental Validation of HMGA2-AS1 as a Prognostic Biomarker Associated with Immune Infiltration in Gastric Cancer
    Lyu, Guizhen
    RECENT PATENTS ON ANTI-CANCER DRUG DISCOVERY, 2024,
  • [28] Identification of KRBA1 as a Potential Prognostic Biomarker Associated with Immune Infiltration and m6A Modification in Hepatocellular Carcinoma
    Liu, Yue
    Fu, Bidong
    Yu, Zichuan
    Song, Gelin
    Zeng, Hong
    Gong, Yiyang
    Ding, Yongqi
    Huang, Da
    JOURNAL OF HEPATOCELLULAR CARCINOMA, 2022, 9 : 497 - 516
  • [29] Identification and Validation of ATF3 Serving as a Potential Biomarker and Correlating With Pharmacotherapy Response and Immune Infiltration Characteristics in Rheumatoid Arthritis
    Hu, Huan
    Zhang, Facai
    Li, Li
    Liu, Jun
    Ao, Qin
    Li, Ping
    Zeng, Jiashun
    Li, Long
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [30] Identification and validation of CCL2 as a potential biomarker relevant to mast cell infiltration in the testicular immune microenvironment of spermatogenic dysfunction
    Fan Dong
    Ping Ping
    Si-Qi Wang
    Yi Ma
    Xiang-Feng Chen
    Cell & Bioscience, 13