Diagnosis of Multisystem Inflammatory Syndrome in Children by a Whole-Blood Transcriptional Signature

被引:11
|
作者
Jackson, Heather R. [1 ,2 ]
Miglietta, Luca [1 ,3 ]
Habgood-Coote, Dominic [1 ,2 ]
D'Souza, Giselle [1 ,2 ]
Shah, Priyen [1 ,2 ]
Nichols, Samuel [1 ,2 ]
Vito, Ortensia [1 ,2 ]
Powell, Oliver [1 ,2 ]
Davidson, Maisey Salina [1 ,2 ]
Shimizu, Chisato [4 ,5 ]
Agyeman, Philipp K. A. [6 ]
Beudeker, Coco R. [7 ]
Brengel-Pesce, Karen [8 ]
Carrol, Enitan D. [9 ]
Carter, Michael J. [10 ,11 ]
De, Tisham [1 ,2 ]
Eleftheriou, Irini [12 ]
Emonts, Marieke [13 ,14 ,15 ,16 ]
Epalza, Cristina [17 ]
Georgiou, Pantelis [3 ]
De Groot, Ronald [18 ,19 ]
Fidler, Katy [20 ]
Fink, Colin [21 ]
van Keulen, Danielle [22 ]
Kuijpers, Taco [23 ,24 ,25 ]
Moll, Henriette [26 ]
Papatheodorou, Irene [27 ]
Paulus, Stephane [28 ,29 ]
Pokorn, Marko [30 ,31 ]
Pollard, Andrew J. [28 ,29 ]
Rivero-Calle, Irene [32 ,33 ,34 ,35 ]
Rojo, Pablo [17 ]
Secka, Fatou [36 ]
Schlapbach, Luregn J. [37 ,38 ,39 ]
Tremoulet, Adriana H. [4 ,5 ]
Tsolia, Maria [12 ]
Usuf, Effua [36 ]
Van der Flier, Michiel [7 ]
Von Both, Ulrich [40 ]
Vermont, Clementien [41 ]
Yeung, Shunmay [42 ]
Zavadska, Dace [43 ]
Zenz, Werner [44 ]
Coin, Lachlan J. M. [45 ]
Cunnington, Aubrey [1 ,2 ]
Burns, Jane C. [4 ,5 ]
Wright, Victoria [1 ,2 ]
Martinon-Torres, Federico [32 ,33 ,34 ,35 ]
Herberg, Jethro A. [1 ,2 ]
Rodriguez-Manzano, Jesus [1 ]
机构
[1] Imperial Coll London, Fac Med, Dept Infect Dis, London, England
[2] Imperial Coll London, Ctr Paediat & Child Hlth, London SW7 2AZ, England
[3] Imperial Coll London, Fac Engn, Dept Elect & Elect Engn, London, England
[4] Rady Childrens Hosp, Dept Pediat, La Jolla, CA USA
[5] Univ Calif San Diego, La Jolla, CA USA
[6] Univ Bern, Bern Univ Hosp, Dept Pediat, Inselspital, Bern, Switzerland
[7] Univ Med Ctr Utrecht, Wilhelmina Childrens Hosp, Dept Paediat Infect Dis & Immunol, Utrecht, Netherlands
[8] Lyon Sud Hosp, Joint Res Unit Hosp Civils Lyon bioMerieux, Pierre Benite, France
[9] Univ Liverpool, Dept Clin Infect Microbiol & Immunol, Inst Infect Vet & Ecol Sci, Liverpool, Merseyside, England
[10] Guys & St Thomas NHS Fdn Trust, Evelina London Childrens Hosp, Paediat Intens Care, London, England
[11] Kings Coll London, St Thomas Hosp, Sch Life Course Sci, Dept Women & Childrens Hlth, London, England
[12] Natl & Kapodistrian Univ Athens NKUA, P&A Kyriakou Childrens Hosp, Sch Med, Dept Paediat 2, Athens, Greece
[13] Newcastle Univ, Translat & Clin Res Inst, Newcastle Upon Tyne, Tyne & Wear, England
[14] Newcastle upon Tyne Hosp Fdn Trust, Great North Childrens Hosp, Paediat Infect Dis & Immunol Dept, Newcastle Upon Tyne, Tyne & Wear, England
[15] Newcastle upon Tyne Hosp NHS Trust, NIHR Newcastle Biomed Res Ctr, Newcastle Upon Tyne, Tyne & Wear, England
[16] Newcastle Univ, Newcastle Upon Tyne, Tyne & Wear, England
[17] Hosp Doce Octubre, Pediat Dept, Pediat Infect Dis Unit, Madrid, Spain
[18] Radboudumc, Dept Pediat, Div Pediat Infect Dis & Immunol, Nijmegen, Netherlands
[19] Radboudumc, Radboud Inst Mol Life Sci, Lab Infect Dis, Nijmegen, Netherlands
[20] Univ Hosp Sussex, Royal Alexandra Childrens Hosp, Acad Dept Paediat, Brighton, E Sussex, England
[21] Univ Warwick, Micropathol Ltd, Warwick, England
[22] SkylineDx, Rotterdam, Netherlands
[23] Univ Amsterdam, Emma Childrens Hosp, Dept Pediat Immunol Rheumatol & Infect Dis, Med Ctr, Amsterdam, Netherlands
[24] Univ Amsterdam, Dept Blood Cell Res, Sanquin Res, Med Ctr, Amsterdam, Netherlands
[25] Univ Amsterdam, Landsteiner Lab, Med Ctr, Amsterdam, Netherlands
[26] Erasmus MC Sophia Childrens Hosp, Dept Pediat, Rotterdam, Netherlands
[27] EMBL European Bioinformat Inst EMBL EBI, Gene Express Team, European Mol Biol Lab, Cambridge, England
[28] Univ Oxford, Dept Paediat, Oxford Vaccine Grp, Oxford, England
[29] NIHR Oxford Biomed Res Ctr, Oxford, England
[30] Univ Med Ctr Ljubljana, Div Pediat, Ljubljana, Slovenia
[31] Univ Ljubljana, Med Fac, Ljubljana, Slovenia
[32] Translat Pediat & Infect Dis Sect, Pediat Dept, Santiago De Compostela, Spain
[33] Univ Santiago de Compostela USC, Inst Invest Sanitaria Santiago IDIS, Genet Vaccines Infect Dis & Pediat Res Grp GENVIP, Santiago De Compostela, Spain
[34] Univ Santiago de Compostela, Dept Anat Patolox & Ciencias Forenses, Unidade Xenet, Inst Ciencias Forenses,Fac Med, Galicia, Spain
[35] Hosp Clin Univ Santiago SERGAS, Inst Invest Sanitarias IDIS, GenPoB Res Grp, Galicia, Spain
[36] Gambia London Sch Hyg & Trop Med, Med Res Council Unit, Banjul, Gambia
[37] Univ Childrens Hosp Zurich, Dept Intens Care & Neonatol, Zurich, Switzerland
[38] Univ Childrens Hosp Zurich, Childrens Res Ctr, Zurich, Switzerland
[39] Univ Queensland, Child Hlth Res Ctr, Brisbane, Qld, Australia
[40] Ludwig Maximilians Univ Munchen, Dr von Hauner Childrens Hosp, Dept Pediat, Div Pediat Infect Dis,Univ Hosp, Munich, Germany
[41] Erasmus MC Sophia Childrens Hosp, Dept Paediat Infect Dis & Immunol, Rotterdam, Netherlands
[42] London Sch Hyg & Trop Med, Fac Infect & Trop Dis, Clin Res Dept, London, England
[43] Childrens Clin Univ Hosp, Dept Pediat, Riga, Latvia
[44] Med Univ Graz, Univ Clin Paediat & Adolescent Med, Dept Gen Paediat, Graz, Austria
[45] Univ Melbourne, Peter Doherty Inst Infect & Immun, Dept Microbiol & Immunol, Melbourne, Vic, Australia
基金
美国国家卫生研究院; 英国惠康基金;
关键词
COVID-19; diagnostic signature; host diagnostics; host response; MIS-C; pediatric infectious diseases; rapid diagnostics; transcriptomics; DISEASE; SARS-COV-2; COVID-19; INFECTIONS; EXPRESSION; DISCOVERY; SEVERITY; SHOCK;
D O I
10.1093/jpids/piad035
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Background To identify a diagnostic blood transcriptomic signature that distinguishes multisystem inflammatory syndrome in children (MIS-C) from Kawasaki disease (KD), bacterial infections, and viral infections.Methods Children presenting with MIS-C to participating hospitals in the United Kingdom and the European Union between April 2020 and April 2021 were prospectively recruited. Whole-blood RNA Sequencing was performed, contrasting the transcriptomes of children with MIS-C (n = 38) to those from children with KD (n = 136), definite bacterial (DB; n = 188) and viral infections (DV; n = 138). Genes significantly differentially expressed (SDE) between MIS-C and comparator groups were identified. Feature selection was used to identify genes that optimally distinguish MIS-C from other diseases, which were subsequently translated into RT-qPCR assays and evaluated in an independent validation set comprising MIS-C (n = 37), KD (n = 19), DB (n = 56), DV (n = 43), and COVID-19 (n = 39).Results In the discovery set, 5696 genes were SDE between MIS-C and combined comparator disease groups. Five genes were identified as potential MIS-C diagnostic biomarkers (HSPBAP1, VPS37C, TGFB1, MX2, and TRBV11-2), achieving an AUC of 96.8% (95% CI: 94.6%-98.9%) in the discovery set, and were translated into RT-qPCR assays. The RT-qPCR 5-gene signature achieved an AUC of 93.2% (95% CI: 88.3%-97.7%) in the independent validation set when distinguishing MIS-C from KD, DB, and DV.Conclusions MIS-C can be distinguished from KD, DB, and DV groups using a 5-gene blood RNA expression signature. The small number of genes in the signature and good performance in both discovery and validation sets should enable the development of a diagnostic test for MIS-C.
引用
收藏
页码:322 / 331
页数:10
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