A deep network DeepOpacityNet for detection of cataracts from color fundus photographs

被引:1
|
作者
Elsawy, Amr [1 ]
Keenan, Tiarnan D. L. [1 ]
Chen, Qingyu [1 ]
Thavikulwat, Alisa T. [2 ]
Bhandari, Sanjeeb [2 ]
Quek, Ten Cheer [3 ]
Goh, Jocelyn Hui Lin [3 ]
Tham, Yih-Chung [3 ,4 ,5 ,6 ]
Cheng, Ching-Yu [3 ,4 ,5 ,6 ]
Chew, Emily Y. [2 ]
Lu, Zhiyong [1 ]
机构
[1] NIH, Natl Ctr Biotechnol Informat, Natl Lib Med, Bethesda, MD 20894 USA
[2] NEI, Div Epidemiol & Clin Applicat, NIH, Bethesda, MD 20892 USA
[3] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore, Singapore
[4] Duke NUS Med Sch, Ophthalmol & Visual Sci Acad Clin Program Eye ACP, Singapore, Singapore
[5] Natl Univ Singapore, Ctr Innovat & Precis Eye Hlth, Yong Loo Lin Sch Med, Singapore, Singapore
[6] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Ophthalmol, Singapore, Singapore
来源
COMMUNICATIONS MEDICINE | 2023年 / 3卷 / 01期
基金
美国国家卫生研究院;
关键词
EYE DISEASES; MACULAR DEGENERATION; DRY EYE; LUTEIN/ZEAXANTHIN; EPIDEMIOLOGY; METHODOLOGY; PREVALENCE; SYSTEMS; TRIAL;
D O I
10.1038/s43856-023-00410-w
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
BackgroundCataract diagnosis typically requires in-person evaluation by an ophthalmologist. However, color fundus photography (CFP) is widely performed outside ophthalmology clinics, which could be exploited to increase the accessibility of cataract screening by automated detection.MethodsDeepOpacityNet was developed to detect cataracts from CFP and highlight the most relevant CFP features associated with cataracts. We used 17,514 CFPs from 2573 AREDS2 participants curated from the Age-Related Eye Diseases Study 2 (AREDS2) dataset, of which 8681 CFPs were labeled with cataracts. The ground truth labels were transferred from slit-lamp examination of nuclear cataracts and reading center grading of anterior segment photographs for cortical and posterior subcapsular cataracts. DeepOpacityNet was internally validated on an independent test set (20%), compared to three ophthalmologists on a subset of the test set (100 CFPs), externally validated on three datasets obtained from the Singapore Epidemiology of Eye Diseases study (SEED), and visualized to highlight important features.ResultsInternally, DeepOpacityNet achieved a superior accuracy of 0.66 (95% confidence interval (CI): 0.64-0.68) and an area under the curve (AUC) of 0.72 (95% CI: 0.70-0.74), compared to that of other state-of-the-art methods. DeepOpacityNet achieved an accuracy of 0.75, compared to an accuracy of 0.67 for the ophthalmologist with the highest performance. Externally, DeepOpacityNet achieved AUC scores of 0.86, 0.88, and 0.89 on SEED datasets, demonstrating the generalizability of our proposed method. Visualizations show that the visibility of blood vessels could be characteristic of cataract absence while blurred regions could be characteristic of cataract presence.ConclusionsDeepOpacityNet could detect cataracts from CFPs in AREDS2 with performance superior to that of ophthalmologists and generate interpretable results. The code and models are available at https://github.com/ncbi/DeepOpacityNet (https://doi.org/10.5281/zenodo.10127002). Cataracts are cloudy areas in the eye that impact sight. Diagnosis typically requires in-person evaluation by an ophthalmologist. In this study, a computer program was developed that can identify cataracts from specialist photographs of the eye. The computer program successfully identified cataracts and was better able to identify these than ophthalmologists. This computer program could be introduced to improve the diagnosis of cataracts in eye clinics. Elsawy, Keenan, Chen et al. detect cataracts from color fundus photography using an explainable deep learning network called DeepOpacityNet. DeepOpacityNet detects cataracts more accurately than ophthalmologists and demonstrates that the absence of blood vessels is an indicator that cataracts are present.
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页数:11
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