Flavobacterium frigoritolerans sp. nov. and Flavobacterium shii sp. nov., isolated from glaciers on the Tibetan Plateau

被引:0
|
作者
Yang, Lei-Lei [1 ]
Liu, Hong-Can [1 ]
Xin, Yu-Hua [1 ]
Liu, Qing [1 ]
机构
[1] Chinese Acad Sci, Inst Microbiol, China Gen Microbiol Culture Collect Ctr CGMCC, Beijing 100101, Peoples R China
基金
中国国家自然科学基金;
关键词
Flavobacterium; glacier; cold; adapted bacteria; EMENDED DESCRIPTION; GENUS FLAVOBACTERIUM; MAXIMUM-LIKELIHOOD; CLASSIFICATION; ALGORITHM; FAMILY; WATER; SOIL;
D O I
10.1099/ijsem.0.005750
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The genus Flavobacterium belongs to the family Flavobacteriaceae and its members are widely distributed in the environment. Taxonomic descriptions of strains LS1R47T and LS1R49T isolated from the Laigu glacier on the Tibetan Plateau, China, are presented in this study. Both strains were psychrotolerant, Gram- stain- negative, aerobic and rod- shaped. The comparative analysis of 16S rRNA gene sequences showed that strain LS1R47T was closest to Flavobacterium bizetiae CIP 105534T (98.90 %) and strain LS1R49T was closest to Flavobacterium collinsii 983-08T (98.73 %). The 16S rRNA gene sequence similarity, average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between the two novel isolates were 99.4, 86.0 and 30.9 %, respectively. The ANI and dDDH values between strains LS1R47T and LS1R49T and their closely relatives were below 87.6 and 33.3 %, respectively. Phylogenomic analysis showed that the two strains cluster together with Flavobacterium hydatis ATCC 29551T. Both strains contained MK- 6 as sole quinone, phosphatidylethanolamine as the principal polar lipid, and summed feature 3 (iso- C15: 0 2- OH and/or C16: 1 & omega;7c), iso-C15: 0 3- OH, C15:0 3- OH and iso- C17: 0 3- OH as the main fatty acids. These results indicated that strains LS1R47T and LS1R49T represented two novel species within the genus Flavobacterium. Therefore, we propose two novel species, Flavobacterium frigoritolerans sp. nov. (LS1R47T=CGMCC 1.11577T=NBRC 113654T) and Flavobacterium shii sp. nov. (LS1R49T=CGMCC 1.11581T=NBRC 113652T).
引用
收藏
页数:8
相关论文
共 50 条
  • [21] The fish pathogen Flavobacterium columnare represents four distinct species: Flavobacterium columnare, Flavobacterium covae sp. nov., Flavobacterium davisii sp. nov. and Flavobacterium oreochromis sp. nov., and emended description of Flavobacterium columnare
    LaFrentz, Benjamin R.
    Kralova, Stanislava
    Burbick, Claire R.
    Alexander, Trevor L.
    Phillips, Conner W.
    Griffin, Matt J.
    Waldbieser, Geoffrey C.
    Garcia, Julio C.
    Sebastiao, Fernanda de Alexandre
    Soto, Esteban
    Loch, Thomas P.
    Liles, Mark R.
    Snekvik, Kevin R.
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 2022, 45 (02)
  • [22] Microbacterium humicola sp. nov., Microbacterium terrisoli sp. nov., Paenibacillus pedocola sp. nov., Paenibacillus silviterrae sp. nov., Flavobacterium terrisoli sp. nov., and Aquabacterium humicola sp. nov., isolated from soil
    Lee, Hyosun
    Chaudhary, Dhiraj Kumar
    Lee, Ki-Eun
    Cha, In-Tae
    Chi, Won-Jae
    Kim, Dong- Uk
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (08)
  • [23] Flavobacterium ranwuense sp. nov., isolated from glacier
    Zhang, Guo-Qing
    Liu, Qing
    Liu, Hong-Can
    Zhou, Yu-Guang
    Xin, Yu-Hua
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (12) : 3812 - 3817
  • [24] Flavobacterium sangjuense sp. nov. isolated from sediment
    Hyangmi Kim
    Sun-Yeon Heo
    Jee-Hwan Kim
    Jong-Chan Chae
    Sang Mi Yu
    Antonie van Leeuwenhoek, 2019, 112 : 1699 - 1704
  • [25] Flavobacterium sangjuense sp. nov. isolated from sediment
    Kim, Hyangmi
    Heo, Sun-Yeon
    Kim, Jee-Hwan
    Chae, Jong-Chan
    Yu, Sang Mi
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (11): : 1699 - 1704
  • [26] Flavobacterium circumlabens sp. nov. and Flavobacterium cupreum sp. nov., two psychrotrophic species isolated from Antarctic environmental samples
    Kralova, Stanislava
    Busse, Hans-Juergen
    Svec, Pavel
    Maslanova, Ivana
    Stankova, Eva
    Bartak, Milos
    Sedlacek, Ivo
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 2019, 42 (03) : 291 - 301
  • [27] Flavobacterium sinopsychrotolerans sp. nov., isolated from a glacier
    Xu, Mingshuang
    Xin, Yuhua
    Tian, Jiesheng
    Dong, Kun
    Yu, Yong
    Zhang, Jianli
    Liu, Hongcan
    Zhou, Yuguang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 20 - 24
  • [28] Flavobacterium tibetense sp. nov., isolated from a wetland
    Phurbu, Dorji
    Lu, Hubin
    Xue, Xiaofeng
    Tian, Yaning
    Pema, Yangzom
    Ma, Chao
    Xing, Peng
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (01) : 165 - 170
  • [29] Flavobacterium ponti sp. nov., isolated from seawater
    Yoon, Jung-Hoon
    Park, Sooyeon
    Kang, So-Jung
    Oh, Soo-Jin
    Myung, Soon Chul
    Kim, Wonyong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 81 - 85
  • [30] Flavobacterium shanxiense sp. nov., Isolated from Soil
    Fan Yang
    Hong-ming Liu
    Rong Zhang
    Ding-bin Chen
    Xiang Wang
    Xin Yan
    Qing Hong
    Shun-peng Li
    Current Microbiology, 2015, 70 : 835 - 839