Errors in structural biology are not the exception

被引:6
|
作者
Gao, Yunyun [1 ]
Thorn, Volker
Thorn, Andrea [1 ]
机构
[1] Univ Hamburg, Inst Nanostruktur & Festkorperphy, Luruper Chaussee 149, D-22761 Hamburg, Germany
关键词
errors; structural biology; modelling; quality indicators; validation; 3-DIMENSIONAL STRUCTURES; CRYSTAL-STRUCTURES; VALIDATION; RECOGNITION;
D O I
10.1107/S2059798322011901
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
During the COVID-19 pandemic, the structural biology community swung into action quickly and efficiently, and many urgent questions were solved by macromolecular structure determination. The Coronavirus Structural Task Force evaluated all structures from SARS-CoV-1 and SARS-CoV-2, but errors in measurement, data processing and modelling are present beyond these structures and throughout the structures deposited in the Protein Data Bank. Identifying them is only the first step; in order to minimize the impact that errors have in structural biology, error culture needs to change. It should be emphasized that the atomic model which is published is an interpretation of the measurement. Furthermore, risks should be minimized by addressing issues early and by investigating the source of a given problem, so that it may be avoided in the future. If we as a community can do this, it will greatly benefit experimental structural biologists as well as downstream users who are using structural models to deduce new biological and medical answers in the future.
引用
收藏
页码:206 / 211
页数:6
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