Whole Genome Sequencing of Vibrio alginolyticus: Insights into Virulence and Antimicrobial Resistance
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作者:
Shahansha, Azhar T. S.
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Cent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, IndiaCent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, India
Shahansha, Azhar T. S.
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Pradeep, M. A.
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Cent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, IndiaCent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, India
Pradeep, M. A.
[1
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Sharma, Krupesha S. R.
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Cent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, IndiaCent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, India
Sharma, Krupesha S. R.
[1
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Sanil, N. K.
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Cent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, IndiaCent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, India
Sanil, N. K.
[1
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机构:
[1] Cent Marine Fisheries Res Inst, Ernakulam North PO, Kochi 682018, Kerala, India
Vibrio alginolyticus is a significant pathogen causing mortality and economic losses in mariculture and illness associated with human gastrointestinal disorders. This paper presents genome characteristics, comparative genome analysis, virulence factors, and antimicrobial resistance of a virulent V. alginolyticus strain (CMFRI-JF260912) isolated from diseased Asian seabass. A genome size of 5.05Mb consist of two circular chromosomes were revealed following genome sequencing using the Illumina HiSeq pipeline. Comparative analysis with other Vibrio species showed a close phylogenetic distance between CMFRI-JF260912 and Vibrio natriegens. Various virulence factors were identified, including genes related to adhesion, biofilm formation, quorum sensing, and toxin production. Four antimicrobial resistance genes namely tetracycline efflux Na+/H+ antiporter, Type B chloramphenicol O-acetyltransferase, carbenicillin-hydrolyzing class A beta-lactamase (CARB-42) and an oxytetracycline resistance phosphoribosyltransferase were also found. These findings enhance our understanding of the pathogenesis and antimicrobial resistance mechanisms of V. alginolyticus and offer valuable insights for mitigating Vibrio infections in aquaculture systems.
机构:
Philipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Ren, Yunxiao
Chakraborty, Trinad
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Justus Liebig Univ Giessen, Inst Med Microbiol, D-35392 Giessen, Germany
German Ctr Infect Res, Partner Site Giessen Marburg Langen, D-35392 Giessen, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Chakraborty, Trinad
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Doijad, Swapnil
Falgenhauer, Linda
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German Ctr Infect Res, Partner Site Giessen Marburg Langen, D-35392 Giessen, Germany
Justus Liebig Univ Giessen, Inst Hyg & Environm Med, D-35392 Giessen, Germany
Hess Univ Kompetenzzentrum Krankenhaushyg, D-35392 Giessen, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Falgenhauer, Linda
Falgenhauer, Jane
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Justus Liebig Univ Giessen, Inst Med Microbiol, D-35392 Giessen, Germany
German Ctr Infect Res, Partner Site Giessen Marburg Langen, D-35392 Giessen, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Falgenhauer, Jane
Goesmann, Alexander
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German Ctr Infect Res, Partner Site Giessen Marburg Langen, D-35392 Giessen, Germany
Justus Liebig Univ Giessen, Dept Bioinformat & Syst Biol, D-35392 Giessen, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Goesmann, Alexander
Hauschild, Anne-Christin
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Philipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Hauschild, Anne-Christin
Schwengers, Oliver
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German Ctr Infect Res, Partner Site Giessen Marburg Langen, D-35392 Giessen, Germany
Justus Liebig Univ Giessen, Dept Bioinformat & Syst Biol, D-35392 Giessen, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
Schwengers, Oliver
Heider, Dominik
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Philipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, GermanyPhilipps Univ Marburg, Fac Math & Comp Sci, Dept Data Sci Biomed, D-35032 Marburg, Germany
机构:
Rajamangala Univ Technol Tawan Ok, Fac Vet Med, Chon Buri, ThailandRajamangala Univ Technol Tawan Ok, Fac Vet Med, Chon Buri, Thailand
Pornsukarom, Suchawan
van Vliet, Arnoud H. M.
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机构:
Univ Surrey, Sch Vet Med, Fac Hlth & Med Sci, Guildford, Surrey, EnglandRajamangala Univ Technol Tawan Ok, Fac Vet Med, Chon Buri, Thailand
van Vliet, Arnoud H. M.
Thakur, Siddhartha
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North Carolina State Univ, Dept Populat Hlth & Pathobiol, Coll Vet Med, Raleigh, NC 27695 USA
North Carolina State Univ, Comparat Med Inst, Raleigh, NC 27695 USARajamangala Univ Technol Tawan Ok, Fac Vet Med, Chon Buri, Thailand
机构:
South Dakota State Univ, Dept Vet & Biomed Sci, Brookings, SD 57007 USA
South Dakota Ctr Biol Res & Commercializat, Brookings, SD 57007 USASouth Dakota State Univ, Dept Vet & Biomed Sci, Brookings, SD 57007 USA
Fenske, Gavin John
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Antony, Linto
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Ghimire, Sudeep
Welsh, Ronald
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Oklahoma State Univ, Oklahoma Anim Dis Diagnost Lab, Stillwater, OK 74078 USASouth Dakota State Univ, Dept Vet & Biomed Sci, Brookings, SD 57007 USA
Welsh, Ronald
Ramachandran, Akhilesh
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Oklahoma State Univ, Oklahoma Anim Dis Diagnost Lab, Stillwater, OK 74078 USASouth Dakota State Univ, Dept Vet & Biomed Sci, Brookings, SD 57007 USA