Complete chloroplast genome and phylogenetic analysis of Smallanthus sonchifolius (Asteraceae)

被引：1
|
作者：
Yin, Juan [1 ]
Wang, Zhen [1 ]
Ma, Guihua [1 ]
Liu, Wenjing [1 ]
机构：
[1] Xinyang Agr & Forestry Univ, Forestry Coll, Xinyang, Henan, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 08期
关键词：
Smallanthus sonchifolius; chloroplast genome; phylogeny; YACON; MILLERIEAE;
D O I：
10.1080/23802359.2023.2248683
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Smallanthus sonchifolius (Asteraceae), is an important food plant in the world. There is no systematic report on the chloroplast genome of S. sonchifolius. Here we reported its complete chloroplast genome and analyzed the basic characteristics. The chloroplast genome was 152,301 bp in length, had a GC content of 37.55%, and encoded 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis showed that the tribe Millerieae and the tribe Madieae are closely related in the Asteraceae family. In the tribe Millerieae, Smallanthus was more closely related to Guizotia and Sigesbeckia. This chloroplast genome not only enriches the genome information of Smallanthus, but also lays the foundation for understanding the phylogeny within the genus Smallanthus.
引用
收藏
页码：916 / 920
页数：5
相关论文
共 50 条
  • [41] The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
    Xu, Jinshi
    Dang, Han
    Li, Huaizhu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1134 - 1135
  • [42] The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
    Zhang, Yuanlan
    Wang, Guibin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2299 - 2300
  • [43] Complete chloroplast genome sequence and phylogenetic analysis of Spathiphyllum 'Parrish'
    Liu, Xiao-Fei
    Zhu, Gen-Fa
    Li, Dong-Mei
    Wang, Xiao-Jing
    PLOS ONE, 2019, 14 (10):
  • [44] The complete chloroplast genome of Enhalus acodoides and its phylogenetic analysis
    Lie, Tao
    Wu, Zhongjie
    Jia, Xuli
    Chen, Shiquan
    Cai, Zefu
    Shen, Jie
    Wang, Daoru
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3667 - 3668
  • [45] The complete chloroplast genome of Cirsium setosum and its phylogenetic analysis
    Xie, Binxin
    Jiang, Chunyan
    Zhu, Ziyan
    Li, Mingzhi
    Zhao, Yucheng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3756 - 3757
  • [46] Comparative and Phylogenetic Analysis of the Complete Chloroplast Genome of Santalum (Santalaceae)
    Liu, Xiaojin
    Xu, Daping
    Hong, Zhou
    Zhang, Ningnan
    Cui, Zhiyi
    FORESTS, 2021, 12 (10):
  • [47] The Complete Chloroplast Genome of Trichopus zeylanicus, And Phylogenetic Analysis with Dioscoreales
    Biju, Vadakkemukadiyil Chellappan
    Shidhi, P. R.
    Vijayan, Sheethal
    Rajan, Veena S.
    Sasi, Anu
    Janardhanan, Akhil
    Nair, Achuthsankar S.
    PLANT GENOME, 2019, 12 (03):
  • [48] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Paeonia ostii
    Guo, Shuai
    Guo, Lili
    Zhao, Wei
    Xu, Jiang
    Li, Yuying
    Zhang, Xiaoyan
    Shen, Xiaofeng
    Wu, Mingli
    Hou, Xiaogai
    MOLECULES, 2018, 23 (02):
  • [49] The complete chloroplast genome of Torreya nucifera (Taxaceae) and phylogenetic analysis
    Shin, Sookyung
    Kim, Sang-Chul
    Hong, Kyung Nak
    Kang, Hyesoon
    Lee, Jei-Wan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2537 - 2538
  • [50] The complete chloroplast genome of Cymbidium longibracteatum (Orchidaceae) and phylogenetic analysis
    Ning, Huijuan
    Shao, Lei
    Dai, Silan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2948 - 2949
12345