LocoBox: Modular Hardware and Open-Source Software for Circadian Entrainment and Behavioral Monitoring in Home Cages

被引:1
|
作者
Truong, Vuong Hung [1 ,2 ]
Myung, Jihwan [1 ,2 ,3 ]
机构
[1] Taipei Med Univ, Grad Inst Mind Brain & Consciousness GIMBC, New Taipei City 235, Taiwan
[2] TMU Shuang Ho Hosp, Brain & Consciousness Res Ctr BCRC, New Taipei City 235, Taiwan
[3] Taipei Med Univ, Grad Inst Med Sci GIMS, Taipei 110, Taiwan
关键词
circadian rhythms; entrainment; activity monitoring; T-cycle; CLOCK; MUTANTS; RODENTS; RHYTHMS;
D O I
10.3390/s23239469
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Day-night locomotor activities are the most readily observed outputs of the circadian (similar to 24-h period) clock in many animals. Temporal patterns of the light-dark schedule serve as input to the clock. While circadian activity patterns under various lighting conditions have been observed and documented, the full extent of circadian locomotor activities by genotype and entrainment remains uncharacterized. To facilitate large-scale, parallel cataloging of circadian input-output patterns, we created the LocoBox, an easy-to-construct and easy-to-operate system that can control environmental light with flexible entrainment scenarios combined with the T-cycle and measure locomotor activities in individual home cages. The LocoBox is made using economical, common components, and normal breeding cages can be used for long-term recording. We provide details of the components and blueprints, along with software programs for Arduino and a Python-based graphical user interface (GUI), so that the system can be easily replicated in other laboratories.
引用
收藏
页数:11
相关论文
共 50 条
  • [31] Open-Source Software for Satellite-Based Crop Health Monitoring
    Kim, James Y.
    JOURNAL OF BIOSYSTEMS ENGINEERING, 2024, : 419 - 433
  • [32] An open-source device for measuring food intake and operant behavior in rodent home-cages
    Matikainen-Ankney, Bridget A.
    Earnest, Thomas
    Ali, Mohamed
    Casey, Eric
    Wang, Justin G.
    Sutton, Amy K.
    Legaria, Alex A.
    Barclay, Kia M.
    Murdaugh, Laura B.
    Norris, Makenzie R.
    Chang, Yu-Hsuan
    Nguyen, Katrina P.
    Lin, Eric
    Reichenbach, Alex
    Clarke, Rachel E.
    Stark, Romana
    Conway, Sineadh M.
    Carvalho, Filipe
    Al-Hasani, Ream
    McCall, Jordan G.
    Creed, Meaghan C.
    Cazares, Victor
    Buczynski, Matthew W.
    Krashes, Michael J.
    Andrews, Zane B.
    Kravitz, Alexxai, V
    ELIFE, 2021, 10
  • [33] Data acquisition system for didactic laboratories based on open-source hardware and free software
    Real, Gustavo
    Raviola, Lisandro
    Jaure, Maria Florencia
    Vitali, Amado Osvaldo
    2015 XVI WORKSHOP ON INFORMATION PROCESSING AND CONTROL (RPIC), 2015,
  • [34] OPTiM: Optical projection tomography integrated microscope using open-source hardware and software
    Watson, Thomas
    Andrews, Natalie
    Davis, Samuel
    Bugeon, Laurence
    Dallman, Margaret D.
    McGinty, James
    PLOS ONE, 2017, 12 (07):
  • [35] Quick Deployment of Open-source Hardware and Software for a Dual-channel Biosignal Recorder
    Zahedi, Edmond
    2013 IEEE INTERNATIONAL CONFERENCE ON SMART INSTRUMENTATION, MEASUREMENT AND APPLICATIONS (ICSIMA 2013), 2013,
  • [36] The Open-source DeLiBA2 Hardware/Software Framework for Distributed Storage Accelerators
    Khan, Babar
    Heinz, Carsten
    Koch, Andreas
    ACM TRANSACTIONS ON RECONFIGURABLE TECHNOLOGY AND SYSTEMS, 2024, 17 (02)
  • [37] A Blockchain-Based Copyright Management Scheme for Open-Source Software and Hardware Designs
    Jin, Yuhang
    Ling, Li
    TSINGHUA SCIENCE AND TECHNOLOGY, 2025, 30 (03): : 1157 - 1173
  • [38] A Low-Cost Lagrangian Drifter Based on Open-Source Hardware and Software Platform
    Cadena, A.
    Vera, S.
    Moreira, M.
    CONFERENCE PROCEEDINGS OF 2018 4TH INTERNATIONAL CONFERENCE ON CONTROL, AUTOMATION AND ROBOTICS (ICCAR), 2018, : 218 - 221
  • [39] Open-source hardware and software for the measurement, characterization, reporting, and correction of geometric distortion in MRI
    Whelan, Brendan M.
    Liu, Paul Z. Y.
    Shan, Shanshan
    Waddington, David E. J.
    Dong, Bin
    Jameson, Michael G.
    Keall, Paul J.
    MEDICAL PHYSICS, 2024, 51 (11) : 8399 - 8410
  • [40] OPEN-SOURCE HARDWARE AND SOFTWARE AND WEB APPLICATION FOR GAMMA DOSE RATE NETWORK OPERATION
    Luff, R.
    Zaehringer, M.
    Harms, W.
    Bleher, M.
    Prommer, B.
    Stoehlker, U.
    RADIATION PROTECTION DOSIMETRY, 2014, 160 (04) : 252 - 258