Phenome-wide Mendelian randomisation analysis identifies causal factors for age-related macular degeneration

被引:17
|
作者
Julian, Thomas H. [1 ,2 ]
Cooper-Knock, Johnathan [3 ]
MacGregor, Stuart [4 ]
Guo, Hui [5 ]
Aslam, Tariq [2 ,6 ]
Sanderson, Eleanor [7 ]
Black, Graeme C. M. [1 ,8 ]
Sergouniotis, Panagiotis, I [1 ,2 ,8 ,9 ]
Smith, Lois E. H.
机构
[1] Univ Manchester, Fac Biol Med & Hlth, Sch Biol Sci, Div Evolut Infect & Genom, Manchester, England
[2] Manchester Univ NHS Fdn Trust, Manchester Royal Eye Hosp, Manchester, England
[3] Univ Sheffield, Sheffield Inst Translat Neurosci SITraN, Dept Neurosci, Sheffield, England
[4] QIMR Berghofer Med Res Inst, Stat Genet, Brisbane, Australia
[5] Univ Manchester, Fac Biol Med & Hlth, Div Populat Hlth Hlth Serv Res & Primary Care, Sch Hlth Sci,Ctr Biostat, Manchester, England
[6] Univ Manchester, Fac Biol Med & Hlth, Sch Hlth Sci, Div Pharm & Optometry, Manchester, England
[7] Univ Bristol, MRC Integrat Epidemiol Unit, Bristol, England
[8] Manchester Univ NHS Fdn Trust, St Marys Hosp, Manchester Ctr Genom Med, Manchester, England
[9] European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Wellcome Genome Campus, Cambridge, England
来源
ELIFE | 2023年 / 12卷
基金
英国惠康基金; 英国医学研究理事会;
关键词
age-related macular degeneration; statistics; macular degeneration; Mendelian randomisation; Mendelian randomization; causal inference; AMD; Human; COMPLEMENT-SYSTEM; FACTOR-H; ASSOCIATION; INSTRUMENTS; CLASSIFICATION; POWERFUL; RISK; BIAS; AMD;
D O I
10.7554/eLife.82546
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Age-related macular degeneration (AMD) is a leading cause of blindness in the industrialised world and is projected to affect > 280 million people worldwide by 2040. Aiming to identify causal factors and potential therapeutic targets for this common condition, we designed and undertook a phenome-wide Mendelian randomisation (MR) study.Methods: We evaluated the effect of 4591 exposure traits on early AMD using univariable MR. Statistically significant results were explored further using: validation in an advanced AMD cohort; MR Bayesian model averaging (MR-BMA); and multivariable MR.Results: Overall, 44 traits were found to be putatively causal for early AMD in univariable analysis. Serum proteins that were found to have significant relationships with AMD included S100-A5 (odds ratio [OR] = 1.07, p-value = 6.80E-06), cathepsin F (OR = 1.10, p-value = 7.16E-05), and serine palmitoyltransferase 2 (OR = 0.86, p-value = 1.00E-03). Univariable MR analysis also supported roles for complement and immune cell traits. Although numerous lipid traits were found to be significantly related to AMD, MR-BMA suggested a driving causal role for serum sphingomyelin (marginal inclusion probability [MIP] = 0.76; model-averaged causal estimate [MACE] = 0.29).Conclusions: The results of this MR study support several putative causal factors for AMD and highlight avenues for future translational research.Funding: This project was funded by the Wellcome Trust (224643/Z/21/Z; 200990/Z/16/Z); the University of Manchester's Wellcome Institutional Strategic Support Fund (Wellcome ISSF) grant (204796/Z/16/Z); the UK National Institute for Health Research (NIHR) Academic Clinical Fellow and Clinical Lecturer Programmes; Retina UK and Fight for Sight (GR586); the Australian National Health and Medical Research Council (NHMRC) (1150144).
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页数:19
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