IL1RL1 polymorphisms rs12479210 and rs1420101 are associated with increased lung cancer risk in the Chinese Han population

被引:4
|
作者
Li, Qi [1 ,2 ]
Zhang, Chan [2 ]
Cheng, Yujing [2 ]
Yang, Xin [2 ]
Chen, Wanlu [2 ]
He, Kunhua [3 ]
Chen, Mingwei [1 ]
机构
[1] Xi An Jiao Tong Univ, Affiliated Hosp 1, Sch Med, Dept Resp Med, Xian, Shaanxi, Peoples R China
[2] Kunming Univ Sci & Technol, Affiliated Hosp, Peoples Hosp Yunnan Prov 1, Dept Blood Transfus, Kunming, Peoples R China
[3] Qujing 1 Hosp, Dept Blood Transfus, Qujing, Peoples R China
关键词
IL1RL1; genetic; polymorphism; lung cancer; case-control study; ST2;
D O I
10.3389/fgene.2023.1183528
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Lung cancer is one of the most common human malignant diseases. In this study, we aimed to explore the association between IL1RL1 genetic polymorphisms and lung cancer risk in the Chinese Han population. Methods: We selected and genotyped six SNPs in the IL1RL1 gene using the Agena MassARRAY system in 507 lung cancer patients and 507 healthy controls. The association between IL1RL1 variants and lung cancer risk was assessed using logistic regression to calculate odds ratios (ORs) and 95% confidence intervals (CIs). Multi-factor dimensionality reduction (MDR) was used to analyze the impact of SNP-SNP interactions on the risk of lung cancer. Results: The results of overall analysis indicated that rs12479210 (T vs. C: OR = 1.42, FDR-p = 0.002; TC vs. CC: OR = 1.70, FDR-p < 0.0001; TT vs. CC: OR = 1.77, FDR-p = 0.032; TT-TC vs. CC: OR = 1.71, FDR-p = 0.001; additive: OR = 1.44, FDR-p = 0.001) and rs1420101 (T vs. C: OR = 1.31, FDR-p = 0.036; TT-TC vs. CC: OR = 1.42, FDR-p = 0.031; additive: OR = 1.30, FDR-p = 0.030) were associated with an increased the risk of lung cancer among the Chinese Han population. Stratified analysis also found the association between these two SNPs and lung cancer risk. However, there were no significant association observed between the other four SNPs (rs3771180, rs3771175, rs10208293, and rs10197862) in IL1RL1 and lung cancer risk. Furthermore, MDR analysis showed that rs12479210 was the best single model with the highest testing accuracy (0.566) and perfect CVC (10/10) for predicting lung cancer risk. The expression level of the IL1RL1 gene is lower in lung cancer tissue than normal tissue, and there are significant differences in the expression levels of IL1RL1 between rs12479210 and rs1420101 genetypes in lung cancer tissue (p < 0.05). Conclusion: Our findings suggest that IL1RL1 genetic variants (rs12479210 and rs1420101) are associated with an increased lung cancer risk in the Chinese Han population. These risk variants may serve as biomarkers for the prevention and treatment of lung cancer.
引用
收藏
页数:13
相关论文
共 50 条
  • [21] Associations of IL6 rs1800795, BLK rs13277113, TIMP3 rs9621532, IL1RL1 rs1041973 and IL1RAP rs4624606 single gene polymorphisms with laryngeal squamous cell carcinoma
    Pasvenskaite, Agne
    Vilkeviciute, Alvita
    Liutkeviciene, Rasa
    Gedvilaite, Greta
    Liutkevicius, Vykintas
    Uloza, Virgilijus
    GENE, 2020, 747
  • [22] Increased hypospadias risk by a GREM1 rs3743104[G] in the southern Han Chinese population
    Deng, Fuming
    Zhao, Jinglu
    Jia, Wei
    Fu, Kai
    Zuo, Xiaoyu
    Huang, Lihua
    Wang, Ning
    Xia, Huiming
    Zhang, Yan
    Fu, Wen
    Liu, Guochang
    AGING-US, 2021, 13 (10): : 13898 - 13908
  • [23] IL-1RNgene polymorphisms reduces thyroid cancer risk in Chinese Han population
    Li, Huajing
    Wu, Yue
    Zhao, Ruimin
    Chen, Xin
    Ren, Wanli
    Li, Honghui
    Han, Peng
    Shao, Yuan
    Wang, Jiansheng
    MOLECULAR CARCINOGENESIS, 2020, 59 (10) : 1140 - 1146
  • [24] Determination of IL-1B (rs16944) and IL-6 (rs1800796) genetic polymorphisms in IgA nephropathy in a northwest Chinese Han population
    Zhang, Daofa
    Xie, Maowei
    Yang, Xiaohong
    Zhang, Yin
    Su, Yan
    Wang, Yanni
    Huang, Haiyang
    Han, Hui
    Li, Wenning
    Fu, Keying
    Su, Huiluan
    Xu, Wentan
    Han, Yeguang
    Wang, Ru
    Zhang, Pei
    Wu, Wei
    Huang, Yun
    Chen, Daojun
    Jin, Tianbo
    Wei, Jiali
    ONCOTARGET, 2017, 8 (42) : 71750 - 71758
  • [25] IL1R1 gene polymorphisms are associated with knee osteoarthritis risk in the Chinese Han population
    Na, Yuyan
    Bai, Rui
    Zhao, Zhenqun
    Wei, Yishan
    Li, Daihe
    Wang, Yong
    Sun, Chao
    Sun, Liang
    Zhang, Bolun
    Jin, Tianbo
    Liu, Wanlin
    ONCOTARGET, 2017, 8 (03) : 4228 - 4233
  • [26] The survival rate of laryngeal squamous cell carcinoma: impact of IL1RAP rs4624606, IL1RL1 rs1041973, IL-6 rs1800795, BLK rs13277113, and TIMP3 rs9621532 single nucleotide polymorphisms
    Agne Pasvenskaite
    Rasa Liutkeviciene
    Greta Gedvilaite
    Alvita Vilkeviciute
    Vykintas Liutkevicius
    Virgilijus Uloza
    Discover Oncology, 14
  • [27] The survival rate of laryngeal squamous cell carcinoma: impact of IL1RAP rs4624606, IL1RL1 rs1041973, IL-6 rs1800795, BLK rs13277113, and TIMP3 rs9621532 single nucleotide polymorphisms
    Pasvenskaite, Agne
    Liutkeviciene, Rasa
    Gedvilaite, Greta
    Vilkeviciute, Alvita
    Liutkevicius, Vykintas
    Uloza, Virgilijus
    DISCOVER ONCOLOGY, 2023, 14 (01)
  • [28] Polymorphisms of rs4787050 and rs8045980 are associated with lung cancer risk in northeast Chinese female nonsmokers
    Li, Xiaoying
    Li, Xuelian
    Yin, Zhihua
    Jiang, Min
    Tian, Wen
    Tang, Man
    Zhou, Baosen
    BIOMARKERS IN MEDICINE, 2019, 13 (13) : 1119 - 1128
  • [29] The functional BRCA1 rs799917 genetic polymorphism is associated with gastric cancer risk in a Chinese Han population
    Wang, Kun
    Xu, Longfang
    Pan, Lin
    Xu, Kesen
    Li, Guixia
    TUMOR BIOLOGY, 2015, 36 (01) : 393 - 397
  • [30] Polymorphisms in the IL-17 Gene (rs2275913 and rs763780) Are Associated with Hepatitis B Virus Infection in the Han Chinese Population
    Ren, Wei
    Wu, Zehua
    Ma, Ruixin
    Liu, Zhen
    Wang, Yingying
    Wu, Liqun
    Liu, Shiguo
    Wang, Zusen
    GENETIC TESTING AND MOLECULAR BIOMARKERS, 2017, 21 (05) : 286 - 291