The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance

被引:25
|
作者
Caswell, Deborah R. [1 ]
Gui, Philippe [2 ]
Mayekar, Manasi K. [2 ]
Law, Emily K. [3 ]
Pich, Oriol [1 ]
Bailey, Chris [1 ]
Boumelha, Jesse [4 ]
Kerr, D. Lucas [2 ]
Blakely, Collin M. [2 ]
Manabe, Tadashi [2 ]
Martinez-Ruiz, Carlos [5 ,6 ]
Bakker, Bjorn [1 ]
Villcas, Juan De Dios Palomino [7 ]
I. Vokes, Natalie [8 ,9 ]
Dietzen, Michelle [1 ,5 ,6 ]
Angelova, Mihaela [1 ]
Gini, Beatrice [2 ]
Tamaki, Whitney [2 ]
Allegakoen, Paul [2 ]
Wu, Wei [2 ]
Humpton, Timothy J. [10 ,11 ,12 ]
Hill, William [1 ]
Tomaschko, Mona [4 ]
Lu, Wei-Ting [1 ]
Haderk, Franziska [2 ]
Al Bakir, Maise [1 ]
Nagano, Ai [1 ]
Gimeno-Valiente, Francisco [6 ]
Trecesson, Sophie de Carne [4 ]
Vendramin, Roberto [1 ]
Barbe, Vittorio [1 ]
Mugabo, Miriam [6 ]
Weeden, Clare E. [1 ]
Rowan, Andrew [1 ]
McCoach, Caroline E. [13 ]
Almeida, Bruna [14 ,15 ]
Green, Mary [16 ]
Gomez, Carlos [2 ]
Nanjo, Shigeki [2 ]
Barbosa, Dora [2 ]
Moore, Chris [4 ]
Przewrocka, Joanna [1 ]
Black, James R. M. [1 ,5 ,6 ]
Gronroos, Eva [1 ]
Suarez-Bonnet, Alejandro [16 ,17 ]
Priestnall, Simon L. [16 ,17 ]
Zverev, Caroline [18 ]
Lighterness, Scott [18 ]
Cormack, James [18 ]
Olivas, Victor [2 ]
机构
[1] Francis Crick Inst, Canc Evolut & Genome Instabil Lab, London, England
[2] Univ Calif San Francisco, Dept Med, San Francisco, CA USA
[3] Univ Minnesota, Dept Biochem Mol Biol & Biophys, Minneapolis, MN USA
[4] Francis Crick Inst, Oncogene Biol Lab, London, England
[5] UCL, Canc Genome Evolut Res Grp, Canc Inst, London, England
[6] UCL Canc Inst, Canc Res UK Lung Canc Ctr Excellence, London, England
[7] Core Res Lab, ISPRO, Florence, Italy
[8] Univ Texas MD Anderson Canc Ctr, Dept Thorac & Head & Neck Med Oncol, Houston, TX USA
[9] Univ Texas MD Anderson Canc Ctr, Dept Genom Med, Houston, TX USA
[10] Francis Crick Inst, P53 & Metab Lab, London, England
[11] CRUK Beatson Inst, Glasgow City, Scotland
[12] Glasgow Caledonian Univ, Glasgow City, Scotland
[13] Genentech Inc, South San Francisco, CA USA
[14] Fdn Liver Res, Roger Williams Inst Hepatol, London, England
[15] Kings Coll London, Fac Life Sci & Med, London, England
[16] Francis Crick Inst, Expt Histopathol, London, England
[17] Royal Vet Coll, Dept Pathobiol & Populat Sci, London, England
[18] Francis Crick Inst, Biol Res Facil, London, England
[19] Cursorless, London, England
[20] Novogene Europe, Dept Geog, Cambridge, England
[21] UCL, Inst Struct & Mol Biol, London, England
[22] Univ Texas Hlth San Antonio, Dept Biochem & Struct Biol, San Antonio, TX USA
[23] Univ Minnesota, Inst Hlth Informat, Minneapolis, MN USA
[24] Univ Minnesota, Masonic Canc Ctr, Minneapolis, MN USA
[25] Univ Minnesota, Sch Dent, Minneapolis, MN USA
[26] Ohio State Univ, Coll Dent, Columbus, OH USA
[27] Sutter Hlth Palo Alto Med Fdn, Dept Pulm & Crit Care, Mountain View, CA USA
[28] Dana Farber Canc Inst, Lowe Ctr Thorac Oncol, Boston, MA USA
[29] Thorac & GI Malignancies Branch, NCI, NIH, Bethesda, MD USA
[30] NextCure INc, Beltsville, MD USA
[31] NCI, NIH, Ctr Canc Res, Dev Therapeut Branch, Bethesda, MD USA
[32] Univ Calif San Francisco, Biomed Sci Program, San Francisco, CA USA
[33] Univ Minnesota, Dept Obstet Gynecol & Womens Hlth, Minneapolis, MN USA
[34] European Inst Oncol, IRCCS, Div Early Drug Dev Innovat Therapy, Milan, Italy
[35] Mem Sloan Kettering Canc Ctr, Dept Pathol, New York, NY USA
[36] Mem Sloan Kettering Canc Ctr, New York, NY USA
[37] Weill Cornell Coll Med, Dept Med, New York, NY USA
[38] Mem Sloan Kettering Canc Ctr, Human Oncol & Pathogenesis Program, New York, NY USA
[39] Mem Sloan Kettering Canc Ctr, Dept Radiat Oncol, New York, NY USA
[40] Univ Coll London Canc Inst, Canc Metastasis Lab, London, England
[41] Univ Coll London Hosp, Dept Med Oncol, London, England
[42] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA USA
[43] Univ Texas Hlth San Antonio, Howard Hughes Med Inst, San Antonio, TX USA
[44] Univ Calif San Francisco, Helen Diller Family Comprehens Canc Ctr, Dept Med & Cellular & Mol Pharmacol, San Francisco, CA 94115 USA
[45] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
基金
英国惠康基金; 英国国家替代、减少和改良动物研究中心; 欧洲研究理事会; 英国医学研究理事会;
关键词
TYROSINE PHOSPHATASE PTPRD; NF-KAPPA-B; MUTATIONAL PROCESSES; KINASE INHIBITOR; DOMAIN MUTATIONS; MOUSE MODELS; EGFR; EXPRESSION; GROWTH; MUTAGENESIS;
D O I
10.1038/s41588-023-01592-8
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study, the impact of the apolipoprotein B mRNA-editing catalytic subunit-like (APOBEC) enzyme APOBEC3B (A3B) on epidermal growth factor receptor (EGFR)-driven lung cancer was assessed. A3B expression in EGFR mutant (EGFRmut) non-small-cell lung cancer (NSCLC) mouse models constrained tumorigenesis, while A3B expression in tumors treated with EGFR-targeted cancer therapy was associated with treatment resistance. Analyses of human NSCLC models treated with EGFR-targeted therapy showed upregulation of A3B and revealed therapy-induced activation of nuclear factor kappa B (NF-kappa B) as an inducer of A3B expression. Significantly reduced viability was observed with A3B deficiency, and A3B was required for the enrichment of APOBEC mutation signatures, in targeted therapy-treated human NSCLC preclinical models. Upregulation of A3B was confirmed in patients with NSCLC treated with EGFR-targeted therapy. This study uncovers the multifaceted roles of A3B in NSCLC and identifies A3B as a potential target for more durable responses to targeted cancer therapy. Analyses of in vivo models, cell lines and patient-derived samples show that apolipoprotein B mRNA-editing catalytic subunit 3B (APOBEC3B) not only restrains lung tumor initiation but also that its upregulation is associated with resistance to targeted therapies. This study highlights the complex and context-dependent role of APOBEC3B in lung cancer.
引用
收藏
页码:60 / 73
页数:38
相关论文
共 50 条
  • [31] Determinants of Oligonucleotide Selectivity of APOBEC3B
    Wagner, Jeffrey R.
    Demir, Ozlem
    Carpenter, Michael A.
    Aihara, Hideki
    Harki, Daniel A.
    Harris, Reuben S.
    Amaro, Rommie E.
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2019, 59 (05) : 2264 - 2273
  • [32] Protein kinase A inhibits tumor mutator APOBEC3B through phosphorylation
    Matsumoto, Tadahiko
    Shirakawa, Kotaro
    Fukuda, Hirofumi
    Sarca, Anamaria Daniela
    Yamazaki, Hiroyuki
    Kazuma, Yasuhiro
    Matsui, Hiroyuki
    Maruyama, Wataru
    Nagata, Kayoko
    Takaori-Kondo, Akifumi
    CANCER SCIENCE, 2018, 109 : 1106 - 1106
  • [33] Protein kinase A inhibits tumor mutator APOBEC3B through phosphorylation
    Tadahiko Matsumoto
    Kotaro Shirakawa
    Masaru Yokoyama
    Hirofumi Fukuda
    Anamaria Daniela Sarca
    Sukenao Koyabu
    Hiroyuki Yamazaki
    Yasuhiro Kazuma
    Hiroyuki Matsui
    Wataru Maruyama
    Kayoko Nagata
    Fumiko Tanabe
    Masayuki Kobayashi
    Keisuke Shindo
    Ryo Morishita
    Hironori Sato
    Akifumi Takaori-Kondo
    Scientific Reports, 9
  • [34] Molecular and clinical impact of APOBEC3B mutagenesis in breast cancer
    Harris, Reuben S.
    MOLECULAR CANCER RESEARCH, 2013, 11
  • [35] Protein kinase A inhibits tumor mutator APOBEC3B through phosphorylation
    Matsumoto, Tadahiko
    Shirakawa, Kotaro
    Yokoyama, Masaru
    Fukuda, Hirofumi
    Sarca, Anamaria Daniela
    Koyabu, Sukenao
    Yamazaki, Hiroyuki
    Kazuma, Yasuhiro
    Matsui, Hiroyuki
    Maruyama, Wataru
    Nagata, Kayoko
    Tanabe, Fumiko
    Kobayashi, Masayuki
    Shindo, Keisuke
    Morishita, Ryo
    Sato, Hironori
    Takaori-Kondo, Akifumi
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [36] APOBEC3B spreads somatic mutations in breast cancer genome
    Forte, Giusi Irma
    TRANSLATIONAL CANCER RESEARCH, 2013, 2 (02) : 97 - 99
  • [37] The mutagenic effects of APOBEC3A and APOBEC3B in urothelial carcinoma
    Sturdivant, Michael S.
    Truong, Andrew S.
    Zhou, Mi
    Damrauer, Jeffrey S.
    Kim, William Y.
    CANCER RESEARCH, 2023, 83 (07)
  • [38] APOBEC3B and APOBEC mutational signature as potential predictive markers for immunotherapy response in non-small cell lung cancer
    Wang, Shixiang
    Jia, Mingming
    He, Zaoke
    Liu, Xue-Song
    ONCOGENE, 2018, 37 (29) : 3924 - 3936
  • [39] APOBEC3B and APOBEC mutational signature as potential predictive markers for immunotherapy response in non-small cell lung cancer
    Shixiang Wang
    Mingming Jia
    Zaoke He
    Xue-Song Liu
    Oncogene, 2018, 37 : 3924 - 3936
  • [40] Mutational impact of APOBEC3A and APOBEC3B in a human cell line and comparisons to breast cancer
    Carpenter, Michael A.
    Temiz, Nuri A.
    Ibrahim, Mahmoud A.
    Jarvis, Matthew C.
    Brown, Margaret R.
    Argyris, Prokopios P.
    Brown, William L.
    Starrett, Gabriel J.
    Yee, Douglas
    Harris, Reuben S.
    PLOS GENETICS, 2023, 19 (11):