Synthesis, structural characterization, Hirshfeld surface and DFT calculations of 2-ethyl-2,4,5-trimethyl-2H-1,3-thiazine-6(3H)-thione

被引:1
|
作者
Castillo, Claudia [1 ]
Mora, Asiloe J. [1 ]
Guillen, Marilia [1 ]
Delgado-Nino, Pilar [2 ]
Araque, Cesar [3 ]
Avila, Edward [4 ]
Contreras, Ricardo R. [5 ]
Delgado, Gerzon E. [1 ]
机构
[1] Univ Los Andes, Lab Cristalog, Dept Quim, Fac Ciencias, Merida, Venezuela
[2] Univ Libre, Fac Ingn, Bogota, Colombia
[3] Univ Agr Ecuador, Fac Ciencias Agr, Guayaquil, Ecuador
[4] Univ Yachay Tech, Fac Ciencias Quim & Ingn, Urcuqul, Ecuador
[5] Univ Los Andes, Fac Ciencias, Dept Quim, Lab Organomet, Merida, Venezuela
关键词
1; 3-thiazine; Sulfur pro-ligand; Crystal structure; Hydrogen bonds; Hirshfeld surface; DFT calculations; HYDROGEN-BOND PATTERNS; X-RAY; DIFFRACTION; POTENTIALS; LIGAND;
D O I
10.1016/j.molstruc.2022.134640
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
2-Ethyl-2,4,5-trimethyl-2H-1,3-thiazine-6(3H)-thione ( 1 ) was synthesized from butanone and carbon disulfide and recrystallized from a 1:1 mixture of ethyl acetate-hexane using the slow solvent evapo-ration technique. MS, FT-IR, and NMR spectroscopy techniques allowed to confirm the skeleton struc-ture of ( 1 ), and its crystal structure was characterized by X-ray diffraction. The powder X-ray diffraction data confirm the phase purity of the crystalline sample. Single-crystal X-ray diffraction analysis indicated that this compound crystallizes in the monoclinic space group P21/n (N degrees 14), with unit cell parameters: a = 6.3710 (16) A, b = 11.537 (3) A, c = 14.292 (4) A, beta = 93.842 (6) degrees, V = 1048.1 (5) A3. Compound ( 1 ) displays a half-chair conformation and, in addition, has a chiral center that indicates the presence of a racemic mixture. X-ray results were compared with DFTB (density-functional tight-binding) theoretical calculations in the solid state, confirming delocalization of electron density in the S1C1C2C3N1 segment of the ring that alters bond distances. The crystalline packing is stabilized by hydrogen bonds of the type N1-H1 middotmiddotS1, which form infinite chains parallel to the b axis and are described by the graph-set symbol C(6). Finally, an analysis of the Hirshfeld surfaces of the compound, allowed to identify additional inter-actions of the type C-H middotmiddotmiddot pi. The most important contributions to the crystal packing correspond to the interactions H middotmiddot H, S middot H / H middotmiddot S and C middotmiddot H / H middotmiddot C with values of 59.8%; 32.20% and 6.40%; respectively.(c) 2022 Elsevier B.V. All rights reserved.
引用
收藏
页数:7
相关论文
共 50 条
  • [31] NEW ORGANIC NITRATES .2. SYNTHESIS OF 2H-PYRIDO[2,3-E]-1,3-OXAZINE-2,4(3H)-DIONES, 2H-PYRIDO[4,3-E]-1,3-OXAZINE-2,4(3H)-DIONES, 2H-PYRIDO[4,3-E]-1,3-OXAZIN-4(3H)-ONES, 2H-THIENO[2,3-E]-1,3-OXAZIN-4(3H)-ONES AND 2H-THIENO[3,4-E]-1,3-OXAZIN-2,4(3H)-DIONES
    BENEDINI, F
    BERTOLINI, G
    FERRARIO, F
    MOTTI, A
    SALA, A
    SOMENZI, F
    JOURNAL OF HETEROCYCLIC CHEMISTRY, 1995, 32 (01) : 103 - 107
  • [32] New regioselective synthesis of 7H-imidazo[2,1-b][1,3]thiazine and 2H,6H-pyrimido[2,1-b][1,3]thiazine derivatives.
    Landreau, C
    Deniaud, D
    Reliquet, A
    Meslin, JC
    SYNTHESIS-STUTTGART, 2002, (03): : 403 - 408
  • [33] Synthesis and structural insights of novel 2-diethylamino-6-methyl-4(3H)-pyrimidinones
    Craciun, L
    Kovacs, D
    Craciun, R
    Mager, S
    HETEROCYCLIC COMMUNICATIONS, 1998, 4 (02) : 157 - 162
  • [34] 4,5-Dichloro-2H-1,3-oxazine-2,6(3H)-dione
    Parrish, Damon
    Glass, Brian
    Rehberg, Gretchen M.
    Kastner, Margaret E.
    ACTA CRYSTALLOGRAPHICA SECTION E-STRUCTURE REPORTS ONLINE, 2009, 65 : O2356 - +
  • [35] REACTION OF 3,4,5,6-TETRAHYDRO-6-HYDROXY-4,4,6-TRIMETHYL-1,3-THIAZINE-2-THIONE WITH SECONDARY-AMINES
    SCHWEIGER, K
    FUCHSGRUBER, A
    ZIGEUNER, G
    MONATSHEFTE FUR CHEMIE, 1977, 108 (01): : 243 - 255
  • [36] Antimycobacterial 3-phenyl-4-thioxo-2H-1,3-benzoxazine-2(3H)-ones and 3-phenyl-2H-1,3-benzoxazine-2,4(3H)-dithiones substituted on phenyl and benzoxazine moiety in position 6
    Eva Petrlíková
    Karel Waisser
    Rafael Doležal
    Pavel Holý
    Jiří Gregor
    Jiři Kuneš
    Jarmila Kaustová
    Chemical Papers, 2011, 65 : 352 - 366
  • [37] Antimycobacterial 3-phenyl-4-thioxo-2H-1,3-benzoxazine-2(3H)-ones and 3-phenyl-2H-1,3-benzoxazine-2,4(3H)-dithiones substituted on phenyl and benzoxazine moiety in position 6
    Petrlikova, Eva
    Waisser, Karel
    Dolezal, Rafael
    Holy, Pavel
    Gregor, Jiri
    Kunes, Jiri
    Kaustova, Jarmila
    CHEMICAL PAPERS, 2011, 65 (03) : 352 - 366
  • [38] A NEW SYNTHESIS OF 6-CHLORO-2-METHYL- AND 6-CHLORO-2-ETHYL-5-METHYL-4(3H)-PYRIMIDONES
    YANAGIDA, S
    OHOKA, M
    OKAHARA, M
    KOMORI, S
    TETRAHEDRON LETTERS, 1968, (19) : 2351 - &
  • [39] A NEW ROUTE TO SYNTHESIS OF 2H-1,3-BENZOXAZINE-2,4(3H)-DIONE
    THYAGARAJAN, BS
    RAJAGOPA.K
    CHEMISTRY & INDUSTRY, 1965, (47) : 1931 - +
  • [40] Synthesis and Crystal Structure of Ethyl 2-(6-(1,3-Dioxo-4,5,6,7-tetrahydro-1H-isoindol-2(3H)-yl)-7-fluoro-3-oxo-2H-benzo[b][1,4]oxazin-4(3H)-yl) Butanoate
    吴道新
    罗斐贤
    莫洪波
    王晓光
    任叶果
    SIMPSON Jim
    黄明智
    结构化学, 2009, 28 (05) : 585 - 589