A Machine Learning Approach for Highlighting microRNAs as Biomarkers Linked to Amyotrophic Lateral Sclerosis Diagnosis and Progression

被引:2
|
作者
Lauria, Graziantonio [1 ]
Curcio, Rosita [1 ]
Tucci, Paola [1 ]
机构
[1] Univ Calabria, Dept Pharm Hlth & Nutr Sci, I-87036 Arcavacata Di Rende, Italy
关键词
ALS; miRNAs; degenerative diseases; clinical markers; prognosis; text mining; digitalization; POTENTIAL BIOMARKERS; CEREBROSPINAL-FLUID; HEXANUCLEOTIDE REPEAT; SKELETAL-MUSCLE; MIRNAS; EXPRESSION; DYSREGULATION; REGENERATION; CRITERIA; C9ORF72;
D O I
10.3390/biom14010047
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Amyotrophic Lateral Sclerosis (ALS) is a fatal neurodegenerative disease characterized by the progressive loss of motor neurons in the brain and spinal cord. The early diagnosis of ALS can be challenging, as it usually depends on clinical examination and the exclusion of other possible causes. In this regard, the analysis of miRNA expression profiles in biofluids makes miRNAs promising non-invasive clinical biomarkers. Due to the increasing amount of scientific literature that often provides controversial results, this work aims to deepen the understanding of the current state of the art on this topic using a machine-learning-based approach. A systematic literature search was conducted to analyze a set of 308 scientific articles using the MySLR digital platform and the Latent Dirichlet Allocation (LDA) algorithm. Two relevant topics were identified, and the articles clustered in each of them were analyzed and discussed in terms of biomolecular mechanisms, as well as in translational and clinical settings. Several miRNAs detected in the tissues and biofluids of ALS patients, including blood and cerebrospinal fluid (CSF), have been linked to ALS diagnosis and progression. Some of them may represent promising non-invasive clinical biomarkers. In this context, future scientific priorities and goals have been proposed.
引用
收藏
页数:18
相关论文
共 50 条
  • [21] Dysregulated microRNAs in amyotrophic lateral sclerosis microglia modulate genes linked to neuroinflammation
    C Parisi
    I Arisi
    N D'Ambrosi
    A E Storti
    R Brandi
    M D'Onofrio
    C Volonté
    Cell Death & Disease, 2013, 4 : e959 - e959
  • [22] Dysregulated microRNAs in amyotrophic lateral sclerosis microglia modulate genes linked to neuroinflammation
    Parisi, C.
    Arisi, I.
    D'Ambrosi, N.
    Storti, A. E.
    Brandi, R.
    D'Onofrio, M.
    Volonté, C.
    CELL DEATH & DISEASE, 2013, 4 : e959 - e959
  • [23] Cerebrospinal fluid biomarkers of disease activity and progression in amyotrophic lateral sclerosis
    Dreger, Marie
    Steinbach, Robert
    Otto, Markus
    Turner, Martin R.
    Grosskreutz, Julian
    JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 2022, 93 (04): : 422 - 435
  • [24] Muscle microRNA signatures as biomarkers of disease progression in amyotrophic lateral sclerosis
    Si, Ying
    Cui, Xianqin
    Crossman, David K.
    Hao, Jiaying
    Kazamel, Mohamed
    Kwon, Yuri
    King, Peter H.
    NEUROBIOLOGY OF DISEASE, 2018, 114 : 85 - 94
  • [25] At-home wearables and machine learning sensitively capture disease progression in amyotrophic lateral sclerosis
    Anoopum S. Gupta
    Siddharth Patel
    Alan Premasiri
    Fernando Vieira
    Nature Communications, 14
  • [26] At-home wearables and machine learning sensitively capture disease progression in amyotrophic lateral sclerosis
    Gupta, Anoopum S.
    Patel, Siddharth
    Premasiri, Alan
    Vieira, Fernando
    NATURE COMMUNICATIONS, 2023, 14 (01)
  • [27] A Knowledge-Based Machine Learning Approach to Gene Prioritisation in Amyotrophic Lateral Sclerosis
    Bean, Daniel M.
    Al-Chalabi, Ammar
    Dobson, Richard J. B.
    Iacoangeli, Alfredo
    GENES, 2020, 11 (06) : 1 - 17
  • [28] Neurophysiological biomarkers in amyotrophic lateral sclerosis
    Vucic, Steve
    Rutkove, Seward B.
    CURRENT OPINION IN NEUROLOGY, 2018, 31 (05) : 640 - 647
  • [29] The Role of MicroRNAs in Patients with Amyotrophic Lateral Sclerosis
    Efthimios Dardiotis
    Athina-Maria Aloizou
    Vasileios Siokas
    George P. Patrinos
    Georgia Deretzi
    Panayiotis Mitsias
    Michael Aschner
    Aristidis Tsatsakis
    Journal of Molecular Neuroscience, 2018, 66 : 617 - 628
  • [30] The Role of MicroRNAs in Patients with Amyotrophic Lateral Sclerosis
    Dardiotis, Efthimios
    Aloizou, Athina-Maria
    Siokas, Vasileios
    Patrinos, George P.
    Deretzi, Georgia
    Mitsias, Panayiotis
    Aschner, Michael
    Tsatsakis, Aristidis
    JOURNAL OF MOLECULAR NEUROSCIENCE, 2018, 66 (04) : 617 - 628