Improved Prediction of Knee Osteoarthritis by the Machine Learning Model XGBoost
被引:3
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作者:
Su, Kui
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Su, Kui
[1
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Yuan, Xin
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Yuan, Xin
[1
]
Huang, Yukai
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机构:
Guangdong Second Prov Gen Hosp, Dept Rheumatol & Immunol, Guangzhou 510317, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Huang, Yukai
[2
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Yuan, Qian
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机构:
Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Yuan, Qian
[1
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Yang, Minghui
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Yang, Minghui
[1
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Sun, Jianwu
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Sun, Jianwu
[1
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Li, Shuyi
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Li, Shuyi
[1
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Long, Xinyi
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Long, Xinyi
[1
]
Liu, Lang
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Liu, Lang
[1
]
Li, Tianwang
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机构:
Guangdong Second Prov Gen Hosp, Dept Rheumatol & Immunol, Guangzhou 510317, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Li, Tianwang
[2
]
Yuan, Zhengqiang
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Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R ChinaGuangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
Yuan, Zhengqiang
[1
]
机构:
[1] Guangdong Univ Technol, Higher Educ Mega Ctr, Sch Biomed & Pharmaceut Sci, 100 Outside Ring West Rd, Guangzhou 510006, Peoples R China
[2] Guangdong Second Prov Gen Hosp, Dept Rheumatol & Immunol, Guangzhou 510317, Peoples R China
ObjectivesThe accurate prediction of osteoarthritis (OA) severity in patients can be helpful to make the proper decision of intervention. This study aims to build up a powerful model to assess predictive risk factors and severity of knee osteoarthritis (KOA) in the clinical scenario.MethodsA total of 4796 KOA cases and 1205 features were selected by feature selections from the public OA database, Osteoarthritis Initiative (OAI). Six machine learning-based models were constructed and compared for the accuracy of OA prediction. The gradient-boosting decision tree was used to identify important prediction features in the extreme gradient boosting (XGBoost) model. The performance of models was evaluated by F1-score.ResultsTwenty features were determined as predictors for KOA risk and severity, including the subject characteristics, knee symptoms/risk factors and physical exam. The XGBoost model demonstrated 100% prediction accuracy for 54.7% of examined samples, and the remaining 45.3% of samples showed Kellgren and Lawrence (KL) gradings very close to the actual levels. It showed the highest prediction accuracy with an F1-score of 0.553 among the tested six models.ConclusionsWe demonstrate that the XGBoost is the best model for the prediction of KOA severity in the six examined models. In addition, 20 risk features were determined as the essential predictors of KOA, including the physical exam, knee symptoms/risk factors and subject characteristics, which may be useful for the identification of high-risk KOA cases and for making appropriate treatment decisions as well.
机构:
Sichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R ChinaSichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R China
Wang, Ruoran
Zhang, Jing
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Sichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R ChinaSichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R China
Zhang, Jing
Shan, Baoyin
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Sichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R ChinaSichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R China
Shan, Baoyin
He, Min
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Sichuan Univ, West China Hosp, Dept Crit Care Med, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R ChinaSichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R China
He, Min
Xu, Jianguo
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Sichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R ChinaSichuan Univ, West China Hosp, Dept Neurosurg, 37 Guoxue Alley, Chengdu 610041, Sichuan, Peoples R China
机构:
Visvesvaraya Technological University, Department of CSE, KS School of Engineering and Management, BangaloreVisvesvaraya Technological University, Department of CSE, KS School of Engineering and Management, Bangalore
Swetha P.
Dayananda R.B.
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Department of CSE, KS Institute of TechnologyVisvesvaraya Technological University, Department of CSE, KS School of Engineering and Management, Bangalore
机构:
School of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Mapúa University, Manila,1002, PhilippinesSchool of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Li, Caihong
Zhang, Huie
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School of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Mapúa University, Manila,1002, PhilippinesSchool of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Zhang, Huie
Huang, Junjie
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Foundation Department, Xi'an Siyuan University, Shaanxi, Xi'an,710038, ChinaSchool of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Huang, Junjie
Shen, Haijie
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School of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Mapúa University, Manila,1002, PhilippinesSchool of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Shen, Haijie
Tian, Xinzhi
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School of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
Mapúa University, Manila,1002, PhilippinesSchool of Electronic Information Engineering, Xi'an Siyuan University, Shaanxi, Xi'an,710038, China
机构:
Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Dezhi Yang
Li Wang
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Li Wang
Penghui Yuan
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Penghui Yuan
Qi An
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Qi An
Bin Su
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Shandong Soteria Pharmaceutical Co., Ltd.Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Bin Su
Mingchao Yu
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Mingchao Yu
Ting Chen
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Ting Chen
Kun Hu
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Kun Hu
Li Zhang
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Li Zhang
Yang Lu
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Beijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
Yang Lu
Guanhua Du
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机构:
Beijing City Key Laboratory of Drug Target and Screening Research, National Center for Pharmaceutical Screening, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical CollegeBeijing City Key Laboratory of Polymorphic Drugs, Center of Pharmaceutical Polymorphs, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College
机构:
Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Yang, Dezhi
Wang, Li
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Wang, Li
Yuan, Penghui
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Yuan, Penghui
An, Qi
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
An, Qi
Su, Bin
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Shandong Soteria Pharmaceut Co Ltd, Laiwu 271100, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Su, Bin
Yu, Mingchao
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Yu, Mingchao
Chen, Ting
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Chen, Ting
Hu, Kun
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Hu, Kun
Zhang, Li
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Zhang, Li
Lu, Yang
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China
Lu, Yang
Du, Guanhua
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Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Natl Ctr Pharmaceut Screening, Beijing City Key Lab Drug Target & Screening Res, Beijing 100050, Peoples R ChinaChinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, Ctr Pharmaceut Polymorphs, Beijing City Key Lab Polymorph Drugs, Beijing 100050, Peoples R China