Comprehensive analysis of complete chloroplast genome sequence of Plantago asiatica L. (Plantaginaceae)

被引:3
|
作者
Wu, Jing [1 ]
Zhang, Jing [1 ]
Guo, Xiaohu [1 ]
Yu, Nianjun [1 ,2 ,3 ]
Peng, Daiyin [1 ,2 ,3 ,5 ]
Xing, Shihai [1 ,2 ,4 ]
机构
[1] Anhui Univ Chinese Med, Coll Pharm, Hefei, Peoples R China
[2] Anhui Acad Chinese Med, Inst Tradit Chinese Med Resources Protect & Dev, Hefei, Peoples R China
[3] MOE Anhui Joint Collaborat Innovat Ctr Qual Improv, Hefei, Peoples R China
[4] Anhui Prov Key Lab Res & Dev Chinese Med, Hefei, Peoples R China
[5] Anhui Univ Chinese Med, Coll Pharm, Hefei 230012, Peoples R China
关键词
Plantago asiatica; plantaginaceae; chloroplast genome; comparative analysis; phylogenetic analysis; MITOCHONDRIAL GENOMES; CODON USAGE; GENE; RNA; TOOLS; MICROSATELLITES; POLYSACCHARIDE; SOFTWARE; MARKERS; REPEAT;
D O I
10.1080/15592324.2022.2163345
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Plantago asiatica L. is a representative individual species of Plantaginaceae, whose high reputation is owed to its edible and medicinal values. However, the phylogeny and genes of the P. asiatica chloroplast have not yet been well described. Here we report the findings of a comprehensive analysis of the P. asiatica chloroplast genome. The P. asiatica chloroplast genome is 164,992 bp, circular, and has a GC content of 37.98%. The circular genome contains 141 genes, including 8 rRNAs, 38 tRNAs, and 95 protein-coding genes. Seventy-two simple sequence repeats are detected. Comparative chloroplast genome analysis of six related species suggests that a higher similarity exists in the coding region than the non-coding region, and differences in the degree of preservation is smaller between P. asiatica and Plantago depressa than among others. Our phylogenetic analysis illustrates P. asiatica has a relatively close relationship with P. depressa, which was also divided into different clades with Plantago ovata and Plantago lagopus in the genus Plantago. This analysis of the P. asiatica chloroplast genome contributes to an improved deeply understanding of the evolutionary relationships among Plantaginaceae.
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页数:15
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