Assessment of pan-Leishmania detection by recombinase polymerase amplification assay

被引:1
|
作者
Louizi, Chiheb [1 ]
Khan, Md Anik Ashfaq [2 ,3 ]
Faisal, Khaledul [3 ]
Chowdhury, Rajashree [3 ]
Ghosh, Prakash [3 ]
Hossain, Faria [3 ]
Nisansala, Thilini [4 ,5 ]
Ranasinghe, Shalindra [5 ]
Moreno, Javier [6 ]
Alvar, Jorge [7 ]
Mondal, Dinesh [3 ,8 ]
Buhl, Timo [9 ]
Luder, Carsten G. K. [1 ]
Wahed, Ahmed Abd El [2 ]
机构
[1] Georg August Univ, Univ Med Ctr Goettingen, Inst Med Microbiol & Virol, Gottingen, Germany
[2] Univ Leipzig, Inst Anim Hyg & Vet Publ Hlth, Leipzig, Germany
[3] Int Ctr Diarrheal Dis Res Bangladesh, Nutr & Clin Serv Div, Dhaka, Bangladesh
[4] Univ Malaysia Kelantan, Fac Vet Med, Pengkalan Chepa, Kota Baru, Kelantan, Malaysia
[5] Univ Sri Jayewardenepura, Fac Med Sci, Gangodawila, Nugegoda, Sri Lanka
[6] WHO Collaborating Ctr Leishmaniasis, Inst Salud Carlos III, Natl Ctr Microbiol, Madrid, Spain
[7] Royal Acad Med Spain, Madrid, Spain
[8] Int Ctr Diarrheal Dis Res Bangladesh, Lab Sci & Serv Div, Dhaka, Bangladesh
[9] Univ Med Ctr Gottingen, Georg August Univ, Dept Dermatol Venereol & Allergol, Gottingen, Germany
关键词
Pan-Leishmania; Recombinase polymeraseamplification; Leishmaniasis; Molecular diagnosis; CUTANEOUS LEISHMANIASIS; CHAIN-REACTION; TIME; IDENTIFICATION; INFECTION;
D O I
10.1016/j.diagmicrobio.2022.115862
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The spread of vector habitats along with increasing human mobility can introduce atypical Leishmania spe-cies and hence can challenge existing diagnostic practices for rapid detection of active infection with species outside the narrow target range. Here we assessed the pan-Leishmania detection ability of isothermal recom-binase polymerase amplification (RPA) assays targeting 18S rRNA gene, cathepsin L-like cysteine proteinase B (Cpb) gene, and kinetoplast minicircle DNA (kDNA) regions. While the lowest limit of detection of the 18S rRNA-RPA and Cpb-RPA assays were estimated as 12 and 17 standard DNA molecules, respectively, both assays could amplify genomic DNA of 7 pathogenic Leishmania species. Evaluation of 18S rRNA-RPA and our previously developed kDNA-RPA assays on 70 real-time PCR-positive leishmaniasis samples of varying pathologies resulted in sensitivity rates of 35.71% and 88.57%, respectively, while the combined sensitivity was 98.57%. Combinatorial application of 18S rRNA-RPA and kDNA-RPA assays can be recommended for fur-ther diagnostic assessments.(c) 2022 Elsevier Inc. All rights reserved.
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页数:7
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