Assessment of pan-Leishmania detection by recombinase polymerase amplification assay

被引:1
|
作者
Louizi, Chiheb [1 ]
Khan, Md Anik Ashfaq [2 ,3 ]
Faisal, Khaledul [3 ]
Chowdhury, Rajashree [3 ]
Ghosh, Prakash [3 ]
Hossain, Faria [3 ]
Nisansala, Thilini [4 ,5 ]
Ranasinghe, Shalindra [5 ]
Moreno, Javier [6 ]
Alvar, Jorge [7 ]
Mondal, Dinesh [3 ,8 ]
Buhl, Timo [9 ]
Luder, Carsten G. K. [1 ]
Wahed, Ahmed Abd El [2 ]
机构
[1] Georg August Univ, Univ Med Ctr Goettingen, Inst Med Microbiol & Virol, Gottingen, Germany
[2] Univ Leipzig, Inst Anim Hyg & Vet Publ Hlth, Leipzig, Germany
[3] Int Ctr Diarrheal Dis Res Bangladesh, Nutr & Clin Serv Div, Dhaka, Bangladesh
[4] Univ Malaysia Kelantan, Fac Vet Med, Pengkalan Chepa, Kota Baru, Kelantan, Malaysia
[5] Univ Sri Jayewardenepura, Fac Med Sci, Gangodawila, Nugegoda, Sri Lanka
[6] WHO Collaborating Ctr Leishmaniasis, Inst Salud Carlos III, Natl Ctr Microbiol, Madrid, Spain
[7] Royal Acad Med Spain, Madrid, Spain
[8] Int Ctr Diarrheal Dis Res Bangladesh, Lab Sci & Serv Div, Dhaka, Bangladesh
[9] Univ Med Ctr Gottingen, Georg August Univ, Dept Dermatol Venereol & Allergol, Gottingen, Germany
关键词
Pan-Leishmania; Recombinase polymeraseamplification; Leishmaniasis; Molecular diagnosis; CUTANEOUS LEISHMANIASIS; CHAIN-REACTION; TIME; IDENTIFICATION; INFECTION;
D O I
10.1016/j.diagmicrobio.2022.115862
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The spread of vector habitats along with increasing human mobility can introduce atypical Leishmania spe-cies and hence can challenge existing diagnostic practices for rapid detection of active infection with species outside the narrow target range. Here we assessed the pan-Leishmania detection ability of isothermal recom-binase polymerase amplification (RPA) assays targeting 18S rRNA gene, cathepsin L-like cysteine proteinase B (Cpb) gene, and kinetoplast minicircle DNA (kDNA) regions. While the lowest limit of detection of the 18S rRNA-RPA and Cpb-RPA assays were estimated as 12 and 17 standard DNA molecules, respectively, both assays could amplify genomic DNA of 7 pathogenic Leishmania species. Evaluation of 18S rRNA-RPA and our previously developed kDNA-RPA assays on 70 real-time PCR-positive leishmaniasis samples of varying pathologies resulted in sensitivity rates of 35.71% and 88.57%, respectively, while the combined sensitivity was 98.57%. Combinatorial application of 18S rRNA-RPA and kDNA-RPA assays can be recommended for fur-ther diagnostic assessments.(c) 2022 Elsevier Inc. All rights reserved.
引用
收藏
页数:7
相关论文
共 50 条
  • [1] NOVEL EXTRACTION PROTOCOL AND RECOMBINASE POLYMERASE AMPLIFICATION ASSAY FOR DETECTION OF LEISHMANIA DONOVANI IN 30 MINUTES
    Mondal, Dinesh
    Ghosh, Prakash
    Khan, Md. Anik Ashfaq
    Hossain, Faria
    Bohlken-Fascher, Susanne
    Matlashewski, Greg
    Kroeger, Axel
    Olliaro, Piero
    Abd El Wahed, Ahmed
    AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2017, 95 (05): : 396 - 397
  • [2] Mobile suitcase laboratory for rapid detection of Leishmania donovani using recombinase polymerase amplification assay
    Dinesh Mondal
    Prakash Ghosh
    Md Anik Ashfaq Khan
    Faria Hossain
    Susanne Böhlken-Fascher
    Greg Matlashewski
    Axel Kroeger
    Piero Olliaro
    Ahmed Abd El Wahed
    Parasites & Vectors, 9
  • [3] Mobile suitcase laboratory for rapid detection of Leishmania donovani using recombinase polymerase amplification assay
    Mondal, Dinesh
    Ghosh, Prakash
    Khan, Md Anik Ashfaq
    Hossain, Faria
    Boehlken-Fascher, Susanne
    Matlashewski, Greg
    Kroeger, Axel
    Olliaro, Piero
    Abd El Wahed, Ahmed
    PARASITES & VECTORS, 2016, 9
  • [4] Recombinase Polymerase Amplification Assay for Rapid Detection of Francisella tularensis
    Euler, Milena
    Wang, Yongjie
    Otto, Peter
    Tomaso, Herbert
    Escudero, Raquel
    Anda, Pedro
    Hufert, Frank T.
    Weidmann, Manfred
    JOURNAL OF CLINICAL MICROBIOLOGY, 2012, 50 (07) : 2234 - 2238
  • [5] A recombinase polymerase amplification assay for rapid detection of rabies virus
    Faye, Martin
    Abd El Wahed, Ahmed
    Faye, Oumar
    Kissenkoetter, Jonas
    Hoffmann, Bernd
    Sall, Amadou Alpha
    Faye, Ousmane
    SCIENTIFIC REPORTS, 2021, 11 (01)
  • [6] Development and Application of a Recombinase Polymerase Amplification Assay for Detection of Salmonella
    Liu, Libing
    Geng, Yunyun
    Jiang, Yanfen
    Liu, Siying
    Sun, Xiaoxia
    Nan, Huizhu
    Wang, Jianchang
    Shipin Kexue/Food Science, 2019, 40 (02): : 298 - 303
  • [7] Development of a Recombinase Polymerase Amplification Assay for the Detection of Pathogenic Leptospira
    Ahmed, Ahmed
    van der Linden, Hans
    Hartskeerl, Rudy A.
    INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2014, 11 (05): : 4953 - 4964
  • [8] Recombinase polymerase amplification assay for rapid detection of Monkeypox virus
    Davi, Saskia Dede
    Kissenkoetter, Jonas
    Faye, Martin
    Boehlken-Fascher, Susanne
    Stahl-Hennig, Christiane
    Faye, Oumar
    Faye, Ousmane
    Sall, Amadou A.
    Weidmann, Manfred
    Ademowo, Olusegun George
    Hufert, Frank T.
    Czerny, Claus-Peter
    Abd El Wahed, Ahmed
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2019, 95 (01) : 41 - 45
  • [9] A recombinase polymerase amplification assay for rapid detection of rabies virus
    Martin Faye
    Ahmed Abd El Wahed
    Oumar Faye
    Jonas Kissenkötter
    Bernd Hoffmann
    Amadou Alpha Sall
    Ousmane Faye
    Scientific Reports, 11
  • [10] Rapid and specific detection of Pentastiridius leporinus by recombinase polymerase amplification assay
    Eini, Omid
    Pfitzer, Rene
    Varrelmann, Mark
    BULLETIN OF ENTOMOLOGICAL RESEARCH, 2024, 114 (03) : 309 - 316