Probing the chemical 'reactome' with high-throughput experimentation data

被引:8
|
作者
King-Smith, Emma [1 ]
Berritt, Simon [2 ]
Bernier, Louise [3 ]
Hou, Xinjun [4 ]
Klug-McLeod, Jacquelyn L. [2 ]
Mustakis, Jason [2 ]
Sach, Neal W. [3 ]
Tucker, Joseph W. [2 ]
Yang, Qingyi [4 ]
Howard, Roger M. [2 ]
Lee, Alpha A. [1 ]
机构
[1] Univ Cambridge, Cavendish Lab, Cambridge, England
[2] Pfizer Global Res & Dev, Groton, CT 06340 USA
[3] Pfizer Res & Dev, La Jolla, CA USA
[4] Pfizer Res & Dev, Cambridge, MA USA
关键词
CATALYZED C-N; ASYMMETRIC HYDROGENATION; COUPLING REACTIONS; LINEAR-REGRESSION; O-ARYLATION; LIGANDS; HYDROGENOLYSIS; TEMPERATURE; AMINATION; MECHANISM;
D O I
10.1038/s41557-023-01393-w
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
High-throughput experimentation (HTE) has the potential to improve our understanding of organic chemistry by systematically interrogating reactivity across diverse chemical spaces. Notable bottlenecks include few publicly available large-scale datasets and the need for facile interpretation of these data's hidden chemical insights. Here we report the development of a high-throughput experimentation analyser, a robust and statistically rigorous framework, which is applicable to any HTE dataset regardless of size, scope or target reaction outcome, which yields interpretable correlations between starting material(s), reagents and outcomes. We improve the HTE data landscape with the disclosure of 39,000+ previously proprietary HTE reactions that cover a breadth of chemistry, including cross-coupling reactions and chiral salt resolutions. The high-throughput experimentation analyser was validated on cross-coupling and hydrogenation datasets, showcasing the elucidation of statistically significant hidden relationships between reaction components and outcomes, as well as highlighting areas of dataset bias and the specific reaction spaces that necessitate further investigation. High-throughput experimentation (HTE) has great utility for chemical synthesis. However, robust interpretation of high-throughput data remains a challenge. Now, a flexible analyser has been developed on the basis of a machine learning-statistical analysis framework, which can reveal hidden chemical insights from historical HTE data of varying scopes, sizes and biases.
引用
收藏
页码:633 / 643
页数:12
相关论文
共 50 条
  • [21] The RNA structurome: high-throughput probing
    Eric Westhof
    Pascale Romby
    Nature Methods, 2010, 7 : 965 - 967
  • [22] Mod-seq: high-throughput sequencing for chemical probing of RNA structure
    Talkish, Jason
    May, Gemma
    Lin, Yizhu
    Woolford, John L., Jr.
    McManus, C. Joel
    RNA, 2014, 20 (05) : 713 - 720
  • [23] Probing the signaling requirements for naive human pluripotency by high-throughput chemical screening
    Khan, Shafqat A.
    Park, Kyoung-mi
    Fischer, Laura A.
    Dong, Chen
    Lungjangwa, Tenzin
    Jimenez, Marta
    Casalena, Dominick
    Chew, Brian
    Dietmann, Sabine
    Auld, Douglas S.
    Jaenisch, Rudolf
    Theunissen, Thorold W.
    CELL REPORTS, 2021, 35 (11):
  • [24] Microbioreactor arrays with parametric control for high-throughput experimentation
    Maharbiz, MM
    Holtz, WJ
    Howe, RT
    Keasling, JD
    BIOTECHNOLOGY AND BIOENGINEERING, 2004, 85 (04) : 376 - 381
  • [25] High-throughput experimentation in materials research and process optimization
    Voelkening, S
    Ohrenberg, A
    Duff, DG
    CHEMIE INGENIEUR TECHNIK, 2004, 76 (06) : 718 - 722
  • [26] A high-throughput methodology for liquid phase adsorption experimentation
    Duerinck, T.
    Leflaive, P.
    Martin, P.
    Pirngruber, G. D.
    Denayer, J. F. M.
    ADSORPTION-JOURNAL OF THE INTERNATIONAL ADSORPTION SOCIETY, 2011, 17 (02): : 347 - 359
  • [27] High-throughput experimentation tools for rapid reaction optimization
    Bellomo, Ana
    Zhang, Jiadi
    Jia, Tiezheng
    Dreher, Spencer D.
    Walsh, Patrick J.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2012, 244
  • [28] A Perspective on the Analytical Challenges Encountered in High-Throughput Experimentation
    Grainger, Rachel
    Whibley, Stuart
    ORGANIC PROCESS RESEARCH & DEVELOPMENT, 2021, 25 (03) : 354 - 364
  • [29] Accelerated Electrosynthesis Development Enabled by High-Throughput Experimentation
    Chen, Huijie
    Mo, Yiming
    SYNTHESIS-STUTTGART, 2023, 55 (18): : 2817 - 2832
  • [30] Miniaturized reactors in combinatorial catalysis and high-throughput experimentation
    Zech, T
    Claus, P
    Hönicke, D
    CHIMIA, 2002, 56 (11) : 611 - 620