Quality Matters:Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases

被引:0
|
作者
Qingyu Chen [1 ]
Ramona Britto [2 ]
Ivan Erill [3 ]
Constance J.Jeffery [4 ]
Arthur Liberzon [5 ]
Michele Magrane [2 ]
Jun-ichi Onami [6 ,7 ]
Marc Robinson-Rechavi [8 ,9 ]
Jana Sponarova [10 ]
Justin Zobel [1 ]
Karin Verspoor [1 ]
机构
[1] School of Computing and Information Systems,University of Melbourne
[2] Japan Science and Technology Agency,National Bioscience Database Center
[3] National Institute of Health Sciences
[4] European Molecular Biology Laboratory,European Bioinformatics Institute (EMBL-EBI),Wellcome Trust Genome Campus
[5] Department of Biological Sciences,University of Illinois at Chicago
[6] Department of Biological Sciences,University of Maryland
[7] Broad Institute of MIT and Harvard
[8] Swiss Institute of Bioinformatics
[9] Nebion AG
[10] Department of Ecology and Evolution,University of Lausanne
基金
澳大利亚研究理事会;
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D O I
暂无
中图分类号
Q811.4 [生物信息论];
学科分类号
0711 ; 0831 ;
摘要
Introduction Biological databases represent an extraordinary collective volume of work.Diligently built up over decades and comprising many millions of contributions from the biomedical research community,biological databases provide worldwide access to a massive number of records (also known as entries)[1].Starting from individual laboratories,genomes are sequenced,
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页码:91 / 103
页数:13
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