Characteristics of rDNA intergenic spacer region from a waterbloom cyanobacteria species Oscillatoria sp.

被引：0
|
作者：
陈月琴
何家莞
唐绍清
庄丽
屈良鹄
机构：
[1] China
[2] Chinese Academy of Sciences
[3] Guangzhou 510275
[4] Institute of Hydrobiology
[5] School of Life Sciences
[6] State Key Laboratory for Biocontrol
[7] Wuhan 430072
[8] Zhongshan University
来源：
Progress in Natural Science | 2000年 / 01期
基金：
中国国家自然科学基金;
关键词：
Oscillatoria sp; rDNA intergenic spacer region; sequence analysis;
D O I：
暂无
中图分类号：
Q75 [分子遗传学];
学科分类号：
071007 ;
摘要：
Sequence of rDNA intergenic spacer region (ISR) from a waterbloom cyanobacterial species Oscilla-toria sp. was determined and analyzed. The results of sequence comparison showed that the spacer had a high level sequence divergence, suggesting the sequence may be a target sequence for developing cyanobacteria genus- and species-specific oligonucleotide probes. In addition, a 20bp sequence of rDNA ISR was found highly conserved in all species of cyanobacteria, which was not found in other eubacteria. This conserved sequence within a variable region indicates that it might be a functional oligonucleotide in the processing of the rRNA precursor.
引用
收藏
页码：39 / 41
页数：3
相关论文
共 50 条
  • [31] Relationships among Brazilian and worldwide isolates of Fusarium oxysporum f. sp. lactucae race 1 inferred from ribosomal intergenic spacer (IGS-rDNA) region and EF-1α gene sequences
    Cléia S. Cabral
    Maria Esther de N. Fonseca
    Kátia R. Brunelli
    Mauricio Rossato
    Hélcio Costa
    Leonardo S. Boiteux
    Ailton Reis
    European Journal of Plant Pathology, 2018, 152 : 81 - 94
  • [32] New diacylgalactolipids from the marine cyanophycean microalga Oscillatoria sp.
    Son, BW
    Kim, JC
    Lee, SM
    Cho, YJ
    Choi, JS
    Choi, HD
    Song, JC
    BULLETIN OF THE KOREAN CHEMICAL SOCIETY, 2000, 21 (11) : 1138 - 1140
  • [33] Effect of medium and light quality on pink pigment production of cyanobacteria Oscillatoria sp. BTCC/A0004
    Karseno
    Harada, Kazuo
    Hirata, Kazumasa
    2ND SCIENTIFIC COMMUNICATION IN FISHERIES AND MARINE SCIENCES (SCIFIMAS 2018), 2018, 47
  • [34] Prospects in Cadmium-Contaminated Water Management Using Free-Living Cyanobacteria (Oscillatoria sp.)
    Bon, Ivan Carralero
    Salvatierra, Lucas M.
    Lario, Luciana D.
    Morato, Jordi
    Perez, Leonardo M.
    WATER, 2021, 13 (04)
  • [35] INTRASPECIFIC VARIATION WITHIN POPULATIONS OF FUSARIUM-OXYSPORUM BASED ON RFLP ANALYSIS OF THE INTERGENIC SPACER REGION OF THE RDNA
    APPEL, DJ
    GORDON, TR
    EXPERIMENTAL MYCOLOGY, 1995, 19 (02): : 120 - 128
  • [36] Cloning and analysis of a 6.8-kb rDNA intergenic spacer region of the European ash (Fraxinus excelsior L)
    Jeandroz, S
    Pugin, A
    Berville, A
    THEORETICAL AND APPLIED GENETICS, 1996, 92 (08) : 1003 - 1008
  • [37] Molecular fingerprinting of clinical Candida glabrata isolates in Kuwait by DNA sequencing of intergenic spacer 2 region of rDNA
    Ahmad, S.
    Fayadh, A.
    Khan, Z. U.
    MYCOSES, 2012, 55 : 238 - 238
  • [38] In vitro screening of antimicrobial, antioxidant, cytotoxic activities, and characterization of bioactive substances from freshwater cyanobacteria Oscillatoria sp. SSCM01 and Phormidium sp. SSCM02
    Nainangu, Prasannabalaji
    Antonyraj, Anahas Perianaika Matharasi
    Subramanian, Kumaran
    Kaliyaperumal, Sowparthani
    Gopal, Suresh
    Renuka, Pugazhvendan Sampath
    Aruni, Wilson A.
    BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY, 2020, 29
  • [39] THE COMPLETE NUCLEOTIDE-SEQUENCE OF THE INTERGENIC SPACER REGION OF AN RDNA OPERON FROM BRASSICA-OLERACEA AND ITS COMPARISON WITH OTHER CRUCIFERS
    BENNETT, RI
    SMITH, AG
    PLANT MOLECULAR BIOLOGY, 1991, 16 (06) : 1095 - 1098
  • [40] Structural analysis of the rDNA Intergenic Spacer of Brassica nigra: Evolutionary divergence of the spacers of the three diploid Brassica species
    Bhatia, S
    Negi, MS
    Lakshmikumaran, M
    JOURNAL OF MOLECULAR EVOLUTION, 1996, 43 (05) : 460 - 468
12345