Estimating Neural Orientation Distribution Fields on High Resolution Diffusion MRI Scans

被引:0
|
作者
Dwedari, Mohammed Munzer [1 ,2 ]
Consagra, William [1 ]
Mueller, Philip [2 ]
Turgut, Oezguen [2 ]
Rueckert, Daniel [2 ]
Rathi, Yogesh [1 ]
机构
[1] Harvard Med Sch, Brigham & Womens Hosp, Psychiat Neuroimaging Lab, Boston, MA 02115 USA
[2] Tech Univ Munich, Munich, Germany
关键词
Orientation Distribution Function; Implicit Neural Representation; Diffusion MRI; MAGNETIC-RESONANCE DATA;
D O I
10.1007/978-3-031-72104-5_30
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
The Orientation Distribution Function (ODF) characterizes key brain microstructural properties and plays an important role in understanding brain structural connectivity. Recent works introduced Implicit Neural Representation (INR) based approaches to form a spatially aware continuous estimate of the ODF field and demonstrated promising results in key tasks of interest when compared to conventional discrete approaches. However, traditional INR methods face difficulties when scaling to large-scale images, such as modern ultra-high-resolution MRI scans, posing challenges in learning fine structures as well as inefficiencies in training and inference speed. In this work, we propose HashEnc, a grid-hash-encoding-based estimation of the ODF field and demonstrate its effectiveness in retaining structural and textural features. We show that HashEnc achieves a 10% enhancement in image quality while requiring 3x less computational resources than current methods. Our code can be found at https://github.com/MunzerDw/NODF-HashEnc.
引用
收藏
页码:307 / 317
页数:11
相关论文
共 50 条
  • [31] A Framework for Myoarchitecture Analysis of High Resolution Cardiac MRI and Comparison with Diffusion Tensor MRI
    Gilbert, Stephen H.
    Sands, Gregory B.
    LeGrice, Ian J.
    Smaill, Bruce H.
    Bernus, Olivier
    Trew, Mark L.
    2012 ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC), 2012, : 4063 - 4066
  • [32] Learning to estimate the fiber orientation distribution function from diffusion-weighted MRI
    Karimi, Davood
    Vasung, Lana
    Jaimes, Camilo
    Machado-Rivas, Fedel
    Warfield, Simon K.
    Gholipour, Ali
    NEUROIMAGE, 2021, 239
  • [33] Fiber orientation distribution from diffusion MRI: Effects of inaccurate response function calibration
    Guo, Fenghua
    Tax, Chantal M. W.
    De Luca, Alberto
    Viergever, Max A.
    Heemskerk, Anneriet
    Leemans, Alexander
    JOURNAL OF NEUROIMAGING, 2021, 31 (06) : 1082 - 1098
  • [34] A DEEP-LEARNING FRAMEWORK FOR ESTIMATING THE POSTERIOR DISTRIBUTION OF THE STANDARD MODEL OF DIFFUSION MRI
    Karimi, Hazhar Sufi
    Ning, Lipeng
    Rathi, Yogesh
    2023 IEEE 20TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, ISBI, 2023,
  • [35] Diffusion MRI abnormalities detection with orientation distribution functions: A multiple sclerosis longitudinal study
    Commowick, Olivier
    Maarouf, Adil
    Ferre, Jean-Christophe
    Ranjeva, Jean-Philippe
    Edan, Gilles
    Barillot, Christian
    MEDICAL IMAGE ANALYSIS, 2015, 22 (01) : 114 - 123
  • [36] Resolution limit of cylinder diameter estimation by diffusion MRI: The impact of gradient waveform and orientation dispersion
    Nilsson, Markus
    Lasic, Samo
    Drobnjak, Ivana
    Topgaard, Daniel
    Westin, Carl-Fredrik
    NMR IN BIOMEDICINE, 2017, 30 (07)
  • [37] High Resolution Diffusion MRI Characterizes Tumor Stromal Boundaries.
    McLaughlin, R. L.
    Newitt, D. C.
    Wilmes, L. J.
    Sinha, S.
    Wisner, D. J.
    Hylton, N. M.
    CANCER RESEARCH, 2011, 71
  • [38] Distance-based tractography in high angular resolution diffusion MRI
    Roettger, Diana
    Seib, Viktor
    Mueller, Stefan
    VISUAL COMPUTER, 2011, 27 (6-8): : 729 - 738
  • [39] High resolution diffusion tensor MRI imaging of Parkinson's disease
    Gitelman, D. R.
    Wu, M.
    Vaillancourt, D.
    Stell, B.
    Parrish, T. B.
    Simuni, T.
    MOVEMENT DISORDERS, 2011, 26 : S243 - S243
  • [40] High temporal resolution diffusion MRI of global cerebral ischemia and reperfusion
    Pierpaoli, C
    Alger, JR
    Righini, A
    Mattiello, J
    Dickerson, R
    Pres, DD
    Barnett, A
    DiChiro, G
    JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM, 1996, 16 (05): : 892 - 905