Identification of a functional CircRNA-miRNA-mRNA network and inhibitory effect of Hsa_circ_0001681 on gliomas

被引:0
|
作者
Cheng, Lilin [1 ,3 ]
Chen, Xu [2 ]
Sun, Wenhua [1 ]
Hu, Xiang [1 ]
Zhang, Shuai [3 ]
Wu, Hui [1 ]
机构
[1] Shanghai Jiao Tong Univ, Renji Hosp, Sch Med, Dept Neurosurg, 160 Pujian Rd, Shanghai 200433, Peoples R China
[2] Shangrao Peoples Hosp, Dept Neurosurg, Shangrao 334000, Peoples R China
[3] Naval Med Univ, Changhai Hosp, Dept Neurosurg, 168 Changhai Rd, Shanghai 200433, Peoples R China
基金
中国国家自然科学基金;
关键词
circRNA; Bioinformatics analysis; Gliomas; circRNA-miRNA-mRNA network; hsa_circ_0001681; Therapeutic targets; CIRCULAR RNAS; CANCER; PROLIFERATION; DATABASE;
D O I
10.1016/j.bbrc.2024.151236
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Objective: Gliomas pose a significant global health challenge due to high rates of morbidity and mortality. Recent research has indicated that circular RNAs (circRNAs) may play a crucial role in gliomas. However, the specific impacts of circRNAs on gliomas development is poorly understood. Therefore, the present study aimed to explore the roles of circRNAs in gliomas by analyzing their interactions with microRNAs (miRNAs) and messenger RNAs (mRNAs). Methods: Datasets were extracted from the Gene Expression Omnibus (GEO) database to investigate differentially expressed circRNAs in gliomas. Using the Circular RNA Interactome, we predicted interactions between the identified circRNAs and 125 target miRNAs, focusing on 15 key miRNAs selected by intersection analysis. The miRNet database was applied to predict 2635 target mRNAs, constructing a comprehensive circRNA-miRNAmRNA network, while functional enrichment analyses were conducted to determine the roles of this network. Results: Four circRNAs with significant differential expression in glioma samples were identified. The constructed network indicated the substantial involvement of transcriptional regulation and cancer-related pathways. Notably, hsa_circ_0001681 was highlighted as a key circRNA, which was further validated through Sanger sequencing and quantitative reverse transcription PCR (qRT-PCR). Functional assays, including cellular assays and animal xenograft experiments, demonstrated that hsa_circ_0001681 inhibits glioma carcinogenesis in vitro and in vivo. Conclusion: Our investigation highlights the significant role of the circRNA-miRNA-mRNA network in the pathophysiology of gliomas, and supports the potential of hsa_circ_0001681 as a diagnostic and therapeutic biomarker. These findings present new opportunities for understanding the molecular mechanisms underlying glioma and developing targeted treatments.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] Identification of Potentially Functional CircRNA-miRNA-mRNA Regulatory Network in Gastric Carcinoma using Bioinformatics Analysis
    Yang, Guodong
    Zhang, Yujiao
    Yang, Jiyuan
    MEDICAL SCIENCE MONITOR, 2019, 25 : 8777 - 8796
  • [22] Identification of Serum Circular RNAs and CircRNA-miRNA-mRNA Network of Gastric Cancer
    Yan, Jin
    Zhang, Guoxin
    JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2018, 33 : 175 - 175
  • [23] Identification of the circRNA-miRNA-mRNA regulatory network in osteoarthritis using bioinformatics analysis
    Xu, Wen-Bin
    Kotheeranurak, Vit
    Zhang, Huang-Lin
    Feng, Jin-Yi
    Liu, Jing-Wei
    Chen, Chien-Min
    Lin, Guang-Xun
    Rui, Gang
    FRONTIERS IN GENETICS, 2022, 13
  • [24] Identification of Potentially Functional CircRNA-miRNA-mRNA Regulatory Network in Hepatocellular Carcinoma by Integrated Microarray Analysis
    Lin, Xiaoming
    Chen, Yuhan
    MEDICAL SCIENCE MONITOR BASIC RESEARCH, 2018, 24 : 70 - 78
  • [25] CircRNA expression profiles of breast cancer and construction of a circRNA-miRNA-mRNA network
    Xu, Liping
    Lyu, Mengmeng
    Yang, Sujin
    Zhang, Jian
    Yu, Dandan
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [26] CircRNA expression pattern and circRNA-miRNA-mRNA network in the pathogenesis of nonalcoholic steatohepatitis
    Jin, Xi
    Feng, Chun-yan
    Xiang, Zun
    Chen, Yi-peng
    Li, You-ming
    ONCOTARGET, 2016, 7 (41) : 66455 - 66467
  • [27] CircRNA expression profiles of breast cancer and construction of a circRNA-miRNA-mRNA network
    Liping Xu
    Mengmeng Lyu
    Sujin Yang
    Jian Zhang
    Dandan Yu
    Scientific Reports, 12
  • [28] Identification of a potentially functional circRNA-miRNA-mRNA ceRNA regulatory network in bladder cancer by analysis of microarray data
    Du, Lei
    Wang, Xin
    Yin, Yuewei
    Zhang, Yanping
    Jia, Jianghua
    Lu, Baosai
    Xue, Wenyong
    Qu, Changbao
    Qi, Jinchun
    TRANSLATIONAL ANDROLOGY AND UROLOGY, 2021, 10 (01) : 24 - 36
  • [29] Identification of the circRNA-miRNA-mRNA Regulatory Network in Pterygium-Associated Conjunctival Epithelium
    Yu, Jianfeng
    Luo, Jiawei
    Li, Pengfei
    Chen, Xiaojuan
    Zhang, Guowei
    Guan, Huaijin
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [30] A regulatory role of circRNA-miRNA-mRNA network in osteoblast differentiation
    Mohanapriya, R.
    Akshaya, R. L.
    Selvamurugan, N.
    BIOCHIMIE, 2022, 193 : 137 - 147