Genome analysis of Lactococcus taiwanensis strain K_LL001 with potential cellulose degrading functions

被引:0
|
作者
Kim, Eun Sol [1 ,2 ]
Cho, Jin Ho [3 ]
Song, Minho [4 ]
Kim, Sheena [1 ]
Keum, Gi Beom [1 ]
Doo, Hyunok [1 ]
Kwak, Jinok [1 ]
Pandey, Sriniwas [1 ]
Ryu, Sumin [1 ]
Choi, Yejin [1 ]
Kang, Juyoun [1 ]
Kim, Hyeun Bum [1 ]
Lee, Ju-Hoon [5 ]
机构
[1] Dankook Univ, Dept Anim Biotechnol, Cheonan 31116, South Korea
[2] Univ North Carolina Chapel Hill, Dept Pediat, Div Infect Dis, Chapel Hill, NC 27599 USA
[3] Chungbuk Natl Univ, Div Food & Anim Sci, Cheongju 28644, South Korea
[4] Chungnam Natl Univ, Div Anim & Dairy Sci, Daejeon 34134, South Korea
[5] Seoul Natl Univ, Res Inst Agr & Life Sci, Ctr Food & Bioconvergence, Dept Food & Anim Biotechnol,Dept Agr Biotechnol, Seoul 08826, South Korea
基金
新加坡国家研究基金会;
关键词
Lactococcus taiwanensis; Pig; Grasshopper; Glycoside hydrolases; Carbohydrates; DATABASE;
D O I
10.5187/jast.2023.e111
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
Lactococcus taiwanensis starin K_LL001 was isolated from the gut of grasshopper (Oxya chinensis sinuosa). In this study, we presented the complete genome sequence of L. taiwanensis stain K_LL001. The genome of K_LL001 genome was composed of 1 circular chromosome without plasmids. The length of the whole genome was 2,018,259bp, guanin + cytosine (G+C) content (%) was 38.75%, with 2,021 predicted protein-coding sequences (CDS). The most abundant CAZyme class in L. taiwanensis strain K_LL001 was glycoside hydrolases (GH) class. GHs is the key enzymes involved in carbohydrate metabolism, and they catalyze the hydrolysis of glycosidic bonds in complex carbohydrates such as cellulose, hemicellulose, and starch. Moreover, L. taiwanensis strain K_LL001 has genes encoding enzymes which can catalyze the transformation of one glycoside to another. Overall, this study will contribute to a further understanding of L. taiwanensis strain K_LL001 at the genomic level and provide a theoretical basis for its future application in swine industry.
引用
收藏
页码:273 / 276
页数:4
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