Distance matters : How protein regulators facilitate enhancer-promoter interactions and transcription

被引:0
|
作者
Nagano, Masahiro [1 ,2 ,3 ,4 ,5 ]
Hansen, Anders S. [1 ,2 ,3 ,4 ]
机构
[1] MIT, Dept Biol Engn, Cambridge, MA 02139 USA
[2] Broad Inst MIT & Harvard, Gene Regulat Observ, Cambridge, MA 02139 USA
[3] Broad Inst MIT & Harvard, Novo Nordisk Fdn Ctr Genom Mech Dis, Cambridge, MA 02142 USA
[4] Koch Inst Integrat Canc Res, Cambridge, MA 02139 USA
[5] Kyoto Univ, Inst Adv Study Human Biol ASHBi, Yoshida Konoe Cho,Sakyo Ku, Kyoto 6068501, Japan
来源
CELL GENOMICS | 2025年 / 5卷 / 03期
关键词
COHESIN; CTCF;
D O I
10.1016/j.xgen.2025.100817
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Cohesin, transcription factors (TFs), and mediator complex components regulate gene expression partly by regulating enhancer-promoter (E-P) communication. A new study combined E-P distance-controlled reporter screens with the inhibition or degradation of regulatory proteins and uncovered a distance-dependent effect across cohesin, TFs, and mediator complex components.
引用
收藏
页数:3
相关论文
共 50 条
  • [1] Enhancer-promoter interactions and transcription
    Higgs, Douglas R.
    NATURE GENETICS, 2020, 52 (05) : 470 - 471
  • [2] Nonlinear control of transcription through enhancer-promoter interactions
    Zuin, Jessica
    Roth, Gregory
    Zhan, Yinxiu
    Cramard, Julie
    Redolfi, Josef
    Piskadlo, Ewa
    Mach, Pia
    Kryzhanovska, Mariya
    Tihanyi, Gergely
    Kohler, Hubertus
    Eder, Mathias
    Leemans, Christ
    van Steensel, Bas
    Meister, Peter
    Smallwood, Sebastien
    Giorgetti, Luca
    NATURE, 2022, 604 (7906) : 571 - +
  • [3] Exploring the interplay between enhancer-promoter interactions and transcription
    Kittle, Ryan H.
    Levo, Michal
    CURRENT OPINION IN GENETICS & DEVELOPMENT, 2025, 90
  • [5] The impact of genomic distance on enhancer-promoter interactions at the CFTR locus
    Kerschner, Jenny L.
    Meckler, Frederick
    Coatti, Giuliana C.
    Vaghela, Nirbhayaditya
    Paranjapye, Alekh
    Harris, Ann
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2024, 28 (04)
  • [6] A systematic study of motif pairs that may facilitate enhancer-promoter interactions
    Wang, Saidi
    Hu, Haiyan
    Li, Xiaoman
    JOURNAL OF INTEGRATIVE BIOINFORMATICS, 2022, 19 (01)
  • [7] Long distance relationships: Enhancer-promoter communication and dynamic gene transcription
    Marsman, Judith
    Horsfield, Julia A.
    BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2012, 1819 (11-12): : 1217 - 1227
  • [8] Enhancer-promoter interactions and transcription (vol 52, pg 470, 2020)
    Higgs, Douglas R.
    NATURE GENETICS, 2021, 53 (05) : 761 - 761
  • [9] Transcription factors mediate long-range enhancer-promoter interactions
    Nolis, Ilias K.
    McKay, Daniel J.
    Mantouvalou, Eva
    Lomvardas, Stavros
    Merika, Menie
    Thanos, Dimitris
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (48) : 20222 - 20227
  • [10] Quantitative prediction of enhancer-promoter interactions
    Belokopytova, Polina S.
    Nuriddinov, Miroslav A.
    Mozheiko, Evgeniy A.
    Fishman, Daniil
    Fishman, Veniamin
    GENOME RESEARCH, 2020, 30 (01) : 72 - 84