Identification of cuproptosis-related lncRNAs signature for predicting the prognosis in patients with kidney renal clear cell carcinoma

被引:0
|
作者
He, Ya
Zhang, Hongxia
Li, Jingang
Zhou, Hui
Wang, Fei
Zhang, Guangliang
Wen, Yuetao [1 ]
机构
[1] Chongqing Univ, Jiangjin Hosp, Sch Med, Dept Neurosurg, 725 Jiangzhou Ave, Chongqing 402260, Peoples R China
来源
关键词
Cuproptosis; Cuproptosis-related lncRNAs; Kidney renal clear cell carcinoma; Tumor immune; LONG NONCODING RNA;
D O I
10.1016/j.jgeb.2023.100338
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Kidney renal clear cell carcinoma (KIRC), with low survival rate, is the most frequent subtype of renal cell carcinoma. Recently, more and more studies indicate that cuproptosis-related genes (CRGs) and long non-coding RNAs (lncRNAs) play a vital role in the occurrence and development of many types of cancers. However, the roles of cuproptosis-related lncRNAs (CRlncRNAs) in the KIRC was uncertain. Results: In our study, CRlncRNAs were obtained by coexpression between differentially expressed and prognostic CRGs and differentially expressed and prognostic lncRNAs, and an 8-CRlncRNAs (AC007743.1, AC022915.1, AP005136.4, APCDD1L-DT, HAGLR, LINC02027, MANCR and SMARCA5-AS1) risk model was established according to least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression. This risk model could differentiate immune cell infiltration, immune function and gene mutation. Conclusions: This 8-CRlncRNAs risk model may be promising for the clinical prediction of prognoses, tumor immune, immunotherapy response and chemotherapeutic response in KIRC patients.
引用
收藏
页数:13
相关论文
共 50 条
  • [41] Cuproptosis-Related lncRNAs are Biomarkers of Prognosis and Immune Microenvironment in Head and Neck Squamous Cell Carcinoma
    Yang, Liuqing
    Yu, Jinling
    Tao, Lu
    Huang, Handan
    Gao, Ying
    Yao, Jingjing
    Liu, Zhihui
    FRONTIERS IN GENETICS, 2022, 13
  • [42] Construction of a Cuproptosis-Related Gene Signature for Predicting Prognosis in Gastric Cancer
    Yongli Hu
    Yan Du
    Zhisheng Qiu
    Pengwei Bai
    Zhaozhao Bai
    Chenglou Zhu
    Junhong Wang
    Tong Liang
    Mingxu Da
    Biochemical Genetics, 2024, 62 : 40 - 58
  • [43] Construction of a Cuproptosis-Related Gene Signature for Predicting Prognosis in Gastric Cancer
    Hu, Yongli
    Du, Yan
    Qiu, Zhisheng
    Bai, Pengwei
    Bai, Zhaozhao
    Zhu, Chenglou
    Wang, Junhong
    Liang, Tong
    Da, Mingxu
    BIOCHEMICAL GENETICS, 2024, 62 (01) : 40 - 58
  • [44] Construction of a cuproptosis-related lncRNA signature for predicting prognosis and immune landscape in osteosarcoma patients
    Ni, Shumin
    Hong, Jinjiong
    Li, Weilong
    Ye, Meng
    Li, Jinyun
    CANCER MEDICINE, 2023, 12 (04): : 5009 - 5024
  • [45] A novel cuproptosis-related gene signature for predicting prognosis in cervical cancer
    Lei, Lei
    Tan, Liao
    Sui, Long
    FRONTIERS IN GENETICS, 2022, 13
  • [46] Cuproptosis-related lncRNA signatures predict prognosis and immune relevance of kidney renal papillary cell carcinoma
    Xie, Tongjin
    Liu, Bin
    Liu, Dongbo
    Zhou, Yusong
    Yang, Qingping
    Wang, Dai
    Tang, Mengjie
    Liu, Wei
    FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [47] Identification of immunogenic cell death-related signature on prognosis and immunotherapy in kidney renal clear cell carcinoma
    Jiang, Silin
    Dong, Yuxiang
    Wang, Jun
    Zhang, Xi
    Liu, Wei
    Wei, Yong
    Zhou, Hai
    Shen, Luming
    Yang, Jian
    Zhu, Qingyi
    FRONTIERS IN IMMUNOLOGY, 2023, 14
  • [48] Comprehensive analysis of cuproptosis-related lncRNAs in immune infiltration and prognosis in hepatocellular carcinoma
    Liu, Chunhua
    Wu, Simin
    Lai, Liying
    Liu, Jinyu
    Guo, Zhaofu
    Ye, Zegen
    Chen, Xiang
    BMC BIOINFORMATICS, 2023, 24 (01)
  • [49] Comprehensive analysis of cuproptosis-related lncRNAs in immune infiltration and prognosis in hepatocellular carcinoma
    Chunhua Liu
    Simin Wu
    Liying Lai
    Jinyu Liu
    Zhaofu Guo
    Zegen Ye
    Xiang Chen
    BMC Bioinformatics, 24
  • [50] The cuproptosis related genes signature predicts the prognosis and correlates with the immune status of clear cell renal cell carcinoma
    Sun, Peng
    Xu, Hua
    Zhu, Ke
    Li, Min
    Han, Rui
    Shen, Jiran
    Xia, Xingyuan
    Chen, Xiaojuan
    Fei, Guanghe
    Zhou, Sijing
    Wang, Ran
    FRONTIERS IN GENETICS, 2022, 13