Improved Gene Detection from Low-Input FFPE Samples Using Total RNA Sequencing

被引：0
|
作者：
Pavlica, J. [1 ]
Haimes, J. [1 ]
Giorda, K. [1 ]
Gelagay, D. [1 ]
Sanders, T. [1 ]
Garnett, A. [1 ]
Hanek, A. [1 ]
Marshall, C. [1 ]
Reed, K. [1 ]
Harrison, T. [1 ]
Kudlow, B. [1 ]
机构：
[1] Watchmaker Genom, Boulder, CO USA
来源：
JOURNAL OF MOLECULAR DIAGNOSTICS | 2024年 / 26卷 / 11期
关键词：
D O I：
暂无
中图分类号：
R36 [病理学];
学科分类号：
100104 ;
摘要：
ST115
引用
收藏
页码：S128 / S128
页数：1
相关论文
共 50 条
  • [41] EXTRACTING HIGH QUALITY RNA FROM FFPE SAMPLES FOR GENE EXPRESSION STUDIES
    Weiss, Jonathan
    Do, Hongdo
    Russell, Prudence A.
    Wright, Gavin
    Dobrovic, Alexander
    JOURNAL OF THORACIC ONCOLOGY, 2013, 8 : S667 - S667
  • [42] A Protocol for Low-Input RNA-Sequencing of Patients with Febrile Neutropenia Captures Relevant Immunological Information
    Probst, Victoria
    Smedegaard, Lotte Moller
    Simonyan, Arman
    Guo, Yuliu
    Ostrup, Olga
    Dungu, Kia Hee Schultz
    Vissing, Nadja Hawwa
    Nygaard, Ulrikka
    Bagger, Frederik Otzen
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (12)
  • [43] Detection of fusion events by RNA sequencing in FFPE versus freshly frozen colorectal cancer tissue samples
    Sorokin, Maxim
    Lyadov, Vladimir
    Suntsova, Maria
    Garipov, Marat
    Semenova, Anna
    Popova, Natalia
    Guguchkin, Egor
    Heydarov, Rustam
    Zolotovskaia, Marianna
    Zhao, Xiaowen
    Yan, Qing
    Wang, Ye
    Karpulevich, Evgeny
    Buzdin, Anton
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2025, 11
  • [44] Low-Input, High-Resolution 5′ Terminal Filovirus RNA Sequencing with ViBE-Seq
    Ross, Stephen J.
    Hume, Adam J.
    Olejnik, Judith
    Turcinovic, Jacquelyn
    Honko, Anna N.
    McKay, Lindsay G. A.
    Connor, John H.
    Griffiths, Anthony
    Muehlberger, Elke
    Cifuentes, Daniel
    VIRUSES-BASEL, 2024, 16 (07):
  • [45] Whole transcriptome and exome targeted RNA sequencing for FFPE tumor samples from clinical trials
    Schleifman, Erica B.
    Kiialainen, Anna
    Roller, Andreas
    Bader, Sabine
    Motlhabi, Maipelo
    Hegde, Priti
    McCaffery, Ian
    Hampton, Garret
    Cannarile, Michael
    Cummings, Craig
    Spleiss, Olivia
    Peters, Eric
    CANCER RESEARCH, 2016, 76
  • [46] Extended RAS minor variant detection by Sanger sequencing from FFPE samples to a 5% Limit of Detection
    Gerstner, A.
    Schreiber, E.
    Schneider, S.
    Jackson, S.
    Kamini, V.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2018, 26 : 598 - 598
  • [47] Improved Sensitivity in Low-Input Proteomics Using Micropillar Array-Based Chromatography
    Stadlmann, Johannes
    Hudecz, Otto
    Krssakova, Gabriela
    Ctortecka, Claudia
    Van Raemdonck, Geert
    Op De Beeck, Jeff
    Desmet, Gert
    Penninger, Josef M.
    Jacobs, Paul
    Mechtler, Karl
    ANALYTICAL CHEMISTRY, 2019, 91 (22) : 14203 - 14207
  • [48] Low-cost, Low-bias and Low-input RNA-seq with High Experimental Verifiability based on Semiconductor Sequencing
    Mai, Zhibiao
    Xiao, Chuanle
    Jin, Jingjie
    Zhang, Gong
    SCIENTIFIC REPORTS, 2017, 7
  • [49] Low-cost, Low-bias and Low-input RNA-seq with High Experimental Verifiability based on Semiconductor Sequencing
    Zhibiao Mai
    Chuanle Xiao
    Jingjie Jin
    Gong Zhang
    Scientific Reports, 7
  • [50] Selective Depletion of Abundant RNAs to Enable Transcriptome Analysis of Low Input and Highly Degraded RNA from FFPE Breast Cancer Samples
    Munafo, D. B.
    Langhorst, B. W.
    Russello, S.
    Stewart, F. J.
    Sinicropi, D.
    Morfan, J.
    Qu, K.
    Liu, M.
    Jeong, J.
    Pho, M.
    Ambannavar, R.
    Dimalanta, E. T.
    Davis, T. B.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2014, 16 (06): : 789 - 789
12345