Development and Application of Fe3+, Al3+, Cr3+ Dummy Atom Models for Metal-Organic Frameworks

被引:0
|
作者
Golo, Dusanka [1 ]
Ahlquist, Marten S. G. [1 ]
Su, Hao [1 ,2 ,3 ,4 ]
机构
[1] KTH Royal Inst Technol, Sch Engn Sci Chem Biotechnol & Hlth, Dept Theoret Chem & Biol, S-10691 Stockholm, Sweden
[2] Chinese Acad Sci, Tianjin Inst Ind Biotechnol, Tianjin 300308, Peoples R China
[3] Natl Ctr Technol Innovat Synthet Biol, Tianjin 300308, Peoples R China
[4] Natl Engn Res Ctr Ind Enzymes, Tianjin 300308, Peoples R China
来源
ACS OMEGA | 2025年 / 10卷 / 04期
基金
中国国家自然科学基金;
关键词
MOLECULAR-DYNAMICS SIMULATIONS; FORCE-FIELD; NONBONDED MODEL; ION; PARAMETERS; HYDRATION; MIL-100; ACCOUNT; CU2+;
D O I
10.1021/acsomega.4c09177
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Various metal-organic frameworks (MOFs) containing trivalent cations (such as Fe3+, Al3+, and Cr3+) have been reported and have shown great potential in applications. However, the high structural diversity and strong electronic interactions between metal centers and their ligands make the molecular dynamics simulations of MOFs challenging. In this work, we developed new dummy atom models for Fe3+, Al3+, and Cr3+ cations, which can be used in classical molecular dynamics simulations of MOFs. In our models, the correct solvation free energies and metal-ligand distances can be simultaneously reproduced. Furthermore, the usefulness and transferability of our models were validated using the commonly studied MIL-100(M) (M = Fe3+, Al3+, Cr3+) and MIL-88B(Fe3+) systems. Our developed models offer a valuable tool for simulating complex systems containing Fe3+, Al3+, and Cr3+ cations with octahedral coordination structures.
引用
收藏
页码:3801 / 3807
页数:7
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