Enhance fashion classification of mosquito vector species via self-supervised vision transformer

被引:0
|
作者
Kittichai, Veerayuth [1 ]
Kaewthamasorn, Morakot [2 ]
Chaiphongpachara, Tanawat [3 ]
Laojun, Sedthapong [3 ]
Saiwichai, Tawee [4 ]
Naing, Kaung Myat [6 ]
Tongloy, Teerawat [6 ]
Boonsang, Siridech [5 ]
Chuwongin, Santhad [6 ]
机构
[1] King Mongkuts Inst Technol Ladkrabang, Fac Med, Bangkok, Thailand
[2] Chulalongkorn Univ, Fac Vet Sci, Vet Parasitol Res Unit, Bangkok, Thailand
[3] Suan Sunandha Rajabhat Univ, Coll Allied Hlth Sci, Dept Publ Hlth & Hlth Promot, Bangkok, Thailand
[4] Mahidol Univ, Fac Publ Hlth, Dept Parasitol & Entomol, Nakhon Pathom, Thailand
[5] King Mongkuts Inst Technol Ladkrabang, Sch Engn, Dept Elect Engn, Bangkok, Thailand
[6] King Mongkuts Inst Technol Ladkrabang, Coll Adv Mfg Innovat, Bangkok, Thailand
来源
SCIENTIFIC REPORTS | 2024年 / 14卷 / 01期
关键词
Mosquito vector species; Artificial intelligence; Self-distillation with unlabeled data; Mobile phone application;
D O I
10.1038/s41598-024-83358-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Vector-borne diseases pose a major worldwide health concern, impacting more than 1 billion people globally. Among various blood-feeding arthropods, mosquitoes stand out as the primary carriers of diseases significant in both medical and veterinary fields. Hence, comprehending their distinct role fulfilled by different mosquito types is crucial for efficiently addressing and enhancing control measures against mosquito-transmitted diseases. The conventional method for identifying mosquito species is laborious and requires significant effort to learn. Classification is subsequently carried out by skilled laboratory personnel, rendering the process inherently time-intensive and restricting the task to entomology specialists. Therefore, integrating artificial intelligence with standard taxonomy, such as molecular techniques, is essential for accurate mosquito species identification. Advancement in novel tools with artificial intelligence has challenged the task of developing an automated system for sample collection and identification. This study aims to introduce a self-supervised Vision Transformer supporting an automatic model for classifying mosquitoes found across various regions of Thailand. The objective is to utilize self-distillation with unlabeled data (DINOv2) to develop models on a mobile phone-captured dataset containing 16 species of female mosquitoes, including those known for transmitting malaria and dengue. The DINOv2 model surpassed the ViT baseline model in precision and recall for all mosquito species. When compared on a species-specific level, utilizing the DINOv2 model resulted in reductions in false negatives and false positives, along with enhancements in precision and recall values, in contrast to the baseline model, across all mosquito species. Notably, at least 10 classes exhibited outstanding performance, achieving above precision and recall rates exceeding 90%. Remarkably, when applying cropping techniques to the dataset instead of utilizing the original photographs, there was a significant improvement in performance across all DINOv2 models studied. This is demonstrated by an increase in recall to 87.86%, precision to 91.71%, F1 score to 88.71%, and accuracy to 98.45%, respectively. Malaria mosquito species can be easily distinguished from another genus like Aedes, Mansonia, Armigeres, and Culex, respectively. While classifying malaria vector species presented challenges for the DINOv2 model, utilizing the cropped images enhanced precision by up to 96% for identifying one of the top three malaria vectors in Thailand, Anopheles minimus. A proficiently trained DINOv2 model, coupled with effective data management, can contribute to the development of a mobile phone application. Furthermore, this method shows promise in supporting field professionals who are not entomology experts in effectively addressing pathogens responsible for diseases transmitted by female mosquitoes.
引用
收藏
页数:16
相关论文
共 50 条
  • [41] Self-Supervised Point Cloud Understanding via Mask Transformer and Contrastive Learning
    Wang, Di
    Yang, Zhi-Xin
    IEEE ROBOTICS AND AUTOMATION LETTERS, 2023, 8 (01) : 184 - 191
  • [42] SMIL-DeiT:Multiple Instance Learning and Self-supervised Vision Transformer network for Early Alzheimer's disease classification
    Yin, Yue
    Jin, Weikang
    Bai, Jing
    Liu, Ruotong
    Zhen, Haowei
    2022 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), 2022,
  • [43] Self-supervised Visual Attribute Learning for Fashion Compatibility
    Kim, Donghyun
    Saito, Kuniaki
    Mishra, Samarth
    Sclaroff, Stan
    Saenko, Kate
    Plummer, Bryan A.
    2021 IEEE/CVF INTERNATIONAL CONFERENCE ON COMPUTER VISION WORKSHOPS (ICCVW 2021), 2021, : 1057 - 1066
  • [44] Self-Supervised Vision Transformer Based Nearest Neighbor Classification for Multi-Source Open-Set Domain Adaptation
    Li, Jing
    Yang, Liu
    Hu, Qinghua
    PRICAI 2022: TRENDS IN ARTIFICIAL INTELLIGENCE, PT III, 2022, 13631 : 542 - 554
  • [45] Self-supervised autoencoders for clustering and classification
    Paraskevi Nousi
    Anastasios Tefas
    Evolving Systems, 2020, 11 : 453 - 466
  • [46] Self-supervised regularization for text classification
    Zhou M.
    Li Z.
    Xie P.
    Transactions of the Association for Computational Linguistics, 2021, 9 : 1147 - 1162
  • [47] Self-supervised autoencoders for clustering and classification
    Nousi, Paraskevi
    Tefas, Anastasios
    EVOLVING SYSTEMS, 2020, 11 (03) : 453 - 466
  • [48] Self-supervised Regularization for Text Classification
    Zhou, Meng
    Li, Zechen
    Xie, Pengtao
    TRANSACTIONS OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS, 2021, 9 : 641 - 656
  • [49] Zero-Shot Text Classification via Self-Supervised Tuning
    Liu, Chaoqun
    Zhang, Wenxuan
    Chen, Guizhen
    Wu, Xiaobao
    Luu, Anh Tuan
    Chang, Chip Hong
    Bing, Lidong
    FINDINGS OF THE ASSOCIATION FOR COMPUTATIONAL LINGUISTICS, ACL 2023, 2023, : 1743 - 1761
  • [50] EVALUATING CONVNET AND TRANSFORMER BASED SELF-SUPERVISED ALGORITHMS FOR BUILDING ROOF FORM CLASSIFICATION
    Mutreja, G.
    Bittner, K.
    GEOSPATIAL WEEK 2023, VOL. 48-1, 2023, : 315 - 321