breast cancer;
molecular subtypes;
radiomics;
mammography;
support vector machine;
naive Bayes;
machine learning;
D O I:
10.3390/jimaging10090218
中图分类号:
TB8 [摄影技术];
学科分类号:
0804 ;
摘要:
Breast cancer is the most commonly diagnosed cancer worldwide. The therapy used and its success depend highly on the histology of the tumor. This study aimed to explore the potential of predicting the molecular subtype of breast cancer using radiomic features extracted from screening digital mammography (DM) images. A retrospective study was performed using the OPTIMAM Mammography Image Database (OMI-DB). Four binary classification tasks were performed: luminal A vs. non-luminal A, luminal B vs. non-luminal B, TNBC vs. non-TNBC, and HER2 vs. non-HER2. Feature selection was carried out by Pearson correlation and LASSO. The support vector machine (SVM) and naive Bayes (NB) ML classifiers were used, and their performance was evaluated with the accuracy and the area under the receiver operating characteristic curve (AUC). A total of 186 patients were included in the study: 58 luminal A, 35 luminal B, 52 TNBC, and 41 HER2. The SVM classifier resulted in AUCs during testing of 0.855 for luminal A, 0.812 for luminal B, 0.789 for TNBC, and 0.755 for HER2, respectively. The NB classifier showed AUCs during testing of 0.714 for luminal A, 0.746 for luminal B, 0.593 for TNBC, and 0.714 for HER2. The SVM classifier outperformed NB with statistical significance for luminal A (p = 0.0268) and TNBC (p = 0.0073). Our study showed the potential of radiomics for non-invasive breast cancer subtype classification.
机构:
NYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
NYU Grossman Sch Med, Dept Biochem & Mol Pharmacol, New York, NY 10016 USANYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
Hong, Runyu
Liu, Wenke
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机构:
NYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
NYU Grossman Sch Med, Dept Biochem & Mol Pharmacol, New York, NY 10016 USANYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
Liu, Wenke
DeLair, Deborah
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机构:
NYU Grossman Sch Med, Dept Pathol, New York, NY 10016 USANYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
DeLair, Deborah
Razavian, Narges
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h-index: 0
机构:
NYU Grossman Sch Med, Dept Populat Hlth, New York, NY 10016 USA
NYU Grossman Sch Med, Dept Radiol, New York, NY 10016 USANYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
Razavian, Narges
Fenyo, David
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机构:
NYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
NYU Grossman Sch Med, Dept Biochem & Mol Pharmacol, New York, NY 10016 USANYU Grossman Sch Med, Inst Syst Genet, New York, NY 10016 USA
机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Zhang, Lan
Zhou, Xin-Xiang
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Zhou, Xin-Xiang
Liu, Lu
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Liu, Lu
Liu, Ao-Yu
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Liu, Ao-Yu
Zhao, Wen-Juan
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Zhao, Wen-Juan
Zhang, Hong-Xia
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Zhang, Hong-Xia
Zhu, Yue-Min
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机构:
Univ Lyon 1, Univ Jean Monnet St Etienne, CREATIS,INSA Lyon, CNRS UMR 5220 INSERM U1206, Lyon, FranceHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Zhu, Yue-Min
Kuai, Zi-Xiang
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机构:
Harbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China
Harbin Med Univ, Imaging Ctr, Canc Hosp, Haping Rd 150, Harbin 150081, Peoples R ChinaHarbin Med Univ, Imaging Ctr, Canc Hosp, Harbin, Peoples R China