openBF: an open-source finite volume 1D blood flow solver

被引:0
|
作者
Benemerito, I [1 ,2 ]
Melis, A. [3 ]
Wehenkel, A. [4 ]
Marzo, A. [1 ,2 ]
机构
[1] Univ Sheffield, INSIGNEO Inst Silico Med, Sheffield, England
[2] Univ Sheffield, Dept Mech Engn, Sheffield, England
[3] VivaCity, London, England
[4] Univ Liege, Liege, Belgium
基金
英国工程与自然科学研究理事会;
关键词
1D modelling; cardiovascular system; open source; validation; WAVE-PROPAGATION; MODEL; HEMODYNAMICS; SIMULATIONS; EQUATIONS;
D O I
10.1088/1361-6579/ad9663
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Computational simulations are widely adopted in cardiovascular biomechanics because of their capability of producing physiological data otherwise impossible to measure with non-invasive modalities. Objective. This study presents openBF, a computational library for simulating the blood dynamics in the cardiovascular system. Approach. openBF adopts a one-dimensional viscoelastic representation of the arterial system, and is coupled with zero-dimensional windkessel models at the outlets. Equations are solved by means of the finite-volume method and the code is written in Julia. We assess its predictions by performing a multiscale validation study on several domains available from the literature. Main results. At all scales, which range from individual arteries to a population of virtual subjects, openBF's solution show excellent agreement with the solutions from existing software. For reported simulations, openBF requires low computational times. Significance. openBF is easy to install, use, and deploy on multiple platforms and architectures, and gives accurate prediction of blood dynamics in short time-frames. It is actively maintained and available open-source on GitHub, which favours contributions from the biomechanical community.
引用
收藏
页数:13
相关论文
共 50 条
  • [41] Validation and scalability of an open source parallel flow solver
    Bricteux, L.
    Zeoli, S.
    Bourgeois, N.
    CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE, 2017, 29 (21):
  • [42] Finite volume model for the simulation of 1D unsteady river flow and water quality based on the WASP
    Gordillo, Geovanny
    Morales-Hernandez, Mario
    Garcia-Navarro, Pilar
    JOURNAL OF HYDROINFORMATICS, 2020, 22 (02) : 327 - 345
  • [43] Finite volume method on simulating 1D shallow-water flow over uneven bottom
    Dong, LY
    Lu, WZ
    Leung, AYT
    COMPUTATIONAL MECHANICS, PROCEEDINGS, 2004, : 300 - 307
  • [44] An open source MATLAB solver for contact finite element analysis
    Wang, Bin
    Bai, Jiantao
    Lu, Shanbin
    Zuo, Wenjie
    ADVANCES IN ENGINEERING SOFTWARE, 2025, 199
  • [45] Spectral Models for 1D Blood Flow Simulations
    Tamburrelli, Vincenzopio
    Ferranti, Francesco
    Antonini, Giulio
    Cristina, Saverio
    Dhaene, Tom
    Knockaert, Luc
    2010 ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC), 2010, : 2598 - 2601
  • [46] A finite element solver and energy stable coupling for 3D and 1D fluid models
    Dobroserdova, Tatiana K.
    Olshanskii, Maxim A.
    COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2013, 259 : 166 - 176
  • [47] clotFoam: An open-source framework to simulate blood clot formation under arterial flow
    Montgomery, David
    Municchi, Federico
    Leiderman, Karin
    SOFTWAREX, 2023, 23
  • [48] Human Head Modelling at Microwave Frequencies Using Open-Source Electromagnetics Solver
    Wang, Yifan
    Abbosh, A. M.
    2015 INTERNATIONAL SYMPOSIUM ON ANTENNAS AND PROPAGATION (ISAP), 2015,
  • [49] LOQUAT: an open-source GPU-accelerated SPH solver for geotechnical modeling
    Chong Peng
    Shun Wang
    Wei Wu
    Hai-sui Yu
    Chun Wang
    Jian-yu Chen
    Acta Geotechnica, 2019, 14 : 1269 - 1287
  • [50] LOQUAT: an open-source GPU-accelerated SPH solver for geotechnical modeling
    Peng, Chong
    Wang, Shun
    Wu, Wei
    Yu, Hai-sui
    Wang, Chun
    Chen, Jian-yu
    ACTA GEOTECHNICA, 2019, 14 (05) : 1269 - 1287