Stable Cox regression for survival analysis under distribution shifts

被引:0
|
作者
Fan, Shaohua [1 ]
Xu, Renzhe [1 ]
Dong, Qian [2 ]
He, Yue [1 ]
Chang, Cheng [2 ]
Cui, Peng [1 ]
机构
[1] Tsinghua Univ, Dept Comp Sci & Technol, Beijing, Peoples R China
[2] Beijing Inst Life, Beijing Proteome Res Ctr, Natl Ctr Prot Sci Beijing, State Key Lab Med Prote, Beijing, Peoples R China
基金
中国博士后科学基金; 中国国家自然科学基金;
关键词
PROPORTIONAL HAZARDS MODEL; VARIABLE SELECTION; GENE-EXPRESSION; MUTATIONS; INFERENCE; BLOCKADE; FEATURES; CANCER; HER2;
D O I
10.1038/s42256-024-00932-5
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Survival analysis aims to estimate the impact of covariates on the expected time until an event occurs, which is broadly utilized in disciplines such as life sciences and healthcare, substantially influencing decision-making and improving survival outcomes. Existing methods, usually assuming similar training and testing distributions, nevertheless face challenges with real-world varying data sources, creating unpredictable shifts that undermine their reliability. This urgently necessitates that survival analysis methods should utilize stable features across diverse cohorts for predictions, rather than relying on spurious correlations. To this end, we propose a stable Cox model with theoretical guarantees to identify stable variables, which jointly optimizes an independence-driven sample reweighting module and a weighted Cox regression model. Through extensive evaluation on simulated and real-world omics and clinical data, stable Cox not only shows strong generalization ability across diverse independent test sets but also stratifies the subtype of patients significantly with the identified biomarker panels.
引用
收藏
页码:1525 / 1541
页数:20
相关论文
共 50 条
  • [21] Regularized distributed Cox regression: a model for federated feature selection in survival analysis
    Gottardelli, B.
    Masciocchi, C.
    Martino, A.
    Boldrini, L.
    Mazzarella, C.
    Grassi, G.
    Massaccesi, M.
    Valentini, V.
    Damiani, A.
    RADIOTHERAPY AND ONCOLOGY, 2022, 170 : S1572 - S1572
  • [22] Extended Survival and Prognostic Factors in Endometrial Cancer: A Multivariate Cox Regression Analysis
    Tellez, Irene Valencia
    Zamora, Laura De Pablo
    Lara, Maria Castillo
    Flores, Claudia Vivas
    Reina, Carlos Vega
    Alba, Juan Jesus Fernandez
    CLINICAL AND EXPERIMENTAL OBSTETRICS & GYNECOLOGY, 2024, 51 (12):
  • [23] The accelerated failure time regression model under the extended-exponential distribution with survival analysis
    Kariuki, Veronica
    Wanjoya, Anthony
    Ngesa, Oscar
    Mansour, Mahmoud M.
    Elrazik, Enayat M. Abd
    Afify, Ahmed Z.
    AIMS MATHEMATICS, 2024, 9 (06): : 15610 - 15638
  • [24] Comparison of Bayesian survival analysis and Cox regression analysis in simulated and breast cancer data sets
    Omurlu, Imran Kurt
    Ozdamar, Kazim
    Ture, Mevlut
    EXPERT SYSTEMS WITH APPLICATIONS, 2009, 36 (08) : 11341 - 11346
  • [25] Estimation of Survival Function in Cox Regression Model Under Random Censoring From Both Sides
    Abdushukurov, A. A.
    COMMUNICATIONS IN STATISTICS-THEORY AND METHODS, 2015, 44 (03) : 533 - 553
  • [26] Cox regression models with functional covariates for survival data
    Gellar, Jonathan E.
    Colantuoni, Elizabeth
    Needham, Dale M.
    Crainiceanu, Ciprian M.
    STATISTICAL MODELLING, 2015, 15 (03) : 256 - 278
  • [27] Confidence intervals for survival quantiles in the Cox regression model
    Lai, Tze Leung
    Su, Zheng
    LIFETIME DATA ANALYSIS, 2006, 12 (04) : 407 - 419
  • [28] Confidence intervals for survival quantiles in the Cox regression model
    Tze Leung Lai
    Zheng Su
    Lifetime Data Analysis, 2006, 12 : 407 - 419
  • [29] Survival analysis for lung cancer patients: A comparison of Cox regression and machine learning models
    Germer, Sebastian
    Rudolph, Christiane
    Labohm, Louisa
    Katalinic, Alexander
    Rath, Natalie
    Rausch, Katharina
    Holleczek, Bernd
    Handels, Heinz
    INTERNATIONAL JOURNAL OF MEDICAL INFORMATICS, 2024, 191
  • [30] High-Dimensional Cox Regression Analysis in Genetic Studies with Censored Survival Outcomes
    Jinfeng Xu
    JOURNAL OF PROBABILITY AND STATISTICS, 2012, 2012