A 3D image segmentation for lung cancer using V.Net architecture based deep convolutional networks

被引:6
|
作者
Mohammed K.K. [1 ,2 ]
Hassanien A.E. [2 ,3 ]
Afify H.M. [2 ,4 ]
机构
[1] Center for Virus Research and Studies, Al-Azhar University, Cairo
[2] Scientific Research Group in Egypt (SRGE), Cairo
[3] Faculty of Computers and Information, Cairo University, Giza
[4] Systems and Biomedical Engineering Department, Higher Institute of Engineering in El-Shorouk City, Cairo
来源
关键词
3D lung segmentation; dice score coefficient (DSC); fully convolutional networks (FCNs); Task06_Lung database; V-Net model;
D O I
10.1080/03091902.2021.1905895
中图分类号
学科分类号
摘要
Lung segmentation of chest CT scan is utilised to identify lung cancer and this step is also critical in other diagnostic pathways. Therefore, powerful algorithms to accomplish this accurate segmentation task are highly needed in the medical imaging domain, where the tumours are required to be segmented with the lung parenchyma. Also, the lung parenchyma needs to be detached from the tumour regions that are often confused with the lung tissue. Recently, lung semantic segmentation is more suitable to allocate each pixel in the image to a predefined class based on fully convolutional networks (FCNs). In this paper, CT cancer scans from the Task06_Lung database were applied to FCN that was inspired by V.Net architecture for efficiently selecting a region of interest (ROI) using the 3D segmentation. This lung database is segregated into 64 training images and 32 testing images. The proposed system is generalised by three steps including data preprocessing, data augmentation and neural network based on the V-Net model. Then, it was evaluated by dice score coefficient (DSC) to calculate the ratio of the segmented image and the ground truth image. This proposed system outperformed other previous schemes for 3D lung segmentation with an average DCS of 80% for ROI and 98% for surrounding lung tissues. Moreover, this system demonstrated that 3D views of lung tumours in CT images precisely carried tumour estimation and robust lung segmentation. © 2021 Informa UK Limited, trading as Taylor & Francis Group.
引用
收藏
页码:337 / 343
页数:6
相关论文
共 50 条
  • [41] Segmentation of Chronic Subdural Hematomas Using 3D Convolutional Neural Networks
    Kellogg, Ryan T.
    Vargas, Jan
    Barros, Guilherme
    Sen, Rajeev
    Bass, David
    Mason, J. Ryan
    Levitt, Michael
    WORLD NEUROSURGERY, 2021, 148 : E58 - E65
  • [42] Fully automated condyle segmentation using 3D convolutional neural networks
    Nayansi Jha
    Taehun Kim
    Sungwon Ham
    Seung-Hak Baek
    Sang-Jin Sung
    Yoon-Ji Kim
    Namkug Kim
    Scientific Reports, 12
  • [43] Fully automated condyle segmentation using 3D convolutional neural networks
    Jha, Nayansi
    Kim, Taehun
    Ham, Sungwon
    Baek, Seung-Hak
    Sung, Sang-Jin
    Kim, Yoon-Ji
    Kim, Namkug
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [44] Using Deep Convolutional Neural Networks for Neonatal Brain Image Segmentation
    Ding, Yang
    Acosta, Rolando
    Enguix, Vicente
    Suffren, Sabrina
    Ortmann, Janosch
    Luck, David
    Dolz, Jose
    Lodygensky, Gregory A.
    FRONTIERS IN NEUROSCIENCE, 2020, 14
  • [45] Lung Nodule Detection Based on 3D Convolutional Neural Networks
    Fan, Lei
    Xia, Zhaoqiang
    Zhang, Xiaobiao
    Feng, Xiaoyi
    2017 INTERNATIONAL CONFERENCE ON THE FRONTIERS AND ADVANCES IN DATA SCIENCE (FADS), 2017, : 7 - 10
  • [46] KUnet: Microscopy Image Segmentation with Deep Unet Based Convolutional Networks
    Wen, Shuo Chang
    Wei, Shih Liao
    2019 IEEE INTERNATIONAL CONFERENCE ON SYSTEMS, MAN AND CYBERNETICS (SMC), 2019, : 3561 - 3566
  • [47] Mitochondria Instance Segmentation in Electron Microscopy Image Volumes using 3D Deep Learning Networks
    Nguyen, Nguyen P.
    White, Tommi A.
    Bunyak, Filiz
    2021 IEEE APPLIED IMAGERY PATTERN RECOGNITION WORKSHOP (AIPR), 2021,
  • [48] Deep 3D Convolutional Neural Network for Automated Lung Cancer Diagnosis
    Mishra, Sumita
    Chaudhary, Naresh Kumar
    Asthana, Pallavi
    Kumar, Anil
    COMPUTING AND NETWORK SUSTAINABILITY, 2019, 75
  • [49] Architecture for 3D Convolutional Neural Networks Based on Temporal Similarity Removal
    De Alwis, Udari
    Alioto, Massimo
    2022 29TH IEEE INTERNATIONAL CONFERENCE ON ELECTRONICS, CIRCUITS AND SYSTEMS (IEEE ICECS 2022), 2022,
  • [50] Automatic segmentation and applicator reconstruction for CT-based brachytherapy of cervical cancer using 3D convolutional neural networks
    Zhang, Daguang
    Yang, Zhiyong
    Jiang, Shan
    Zhou, Zeyang
    Meng, Maobin
    Wang, Wei
    JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, 2020, 21 (10): : 158 - 169