mpsqd: A matrix product state based Python']Python package to simulate closed and open system quantum dynamics

被引:1
|
作者
Guan, Weizhong [1 ,2 ]
Bao, Peng [1 ]
Peng, Jiawei [3 ,4 ,5 ,6 ]
Lan, Zhenggang [3 ,4 ,5 ]
Shi, Qiang [1 ,2 ]
机构
[1] Chinese Acad Sci, Inst Chem, Beijing Natl Lab Mol Sci, State Key Lab Struct Chem Unstable & Stable Specie, Beijing 100190, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[3] South China Normal Univ, SCNU Environm Res Inst, Guangdong Prov Key Lab Chem Pollut & Environm Safe, Guangzhou 510006, Peoples R China
[4] South China Normal Univ, MOE Key Lab Environm Theoret Chem, Guangzhou 510006, Peoples R China
[5] South China Normal Univ, Sch Environm, Guangzhou 510006, Peoples R China
[6] South China Normal Univ, Sch Chem, Guangzhou, Peoples R China
来源
JOURNAL OF CHEMICAL PHYSICS | 2024年 / 161卷 / 12期
关键词
POLARON MOTION; COMPLEX; EXCITATION; COHERENCE; PYRAZINE;
D O I
10.1063/5.0226214
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We introduce a Python package based on matrix product states (MPS) to simulate both the time-dependent Schr & ouml;dinger equation (TDSE) and the hierarchical equations of motion (HEOM). The wave function in the TDSE or the reduced density operator/auxiliary density operators in the HEOM are represented using MPS. A matrix product operator (MPO) is then constructed to represent the Hamiltonian in the TDSE or the generalized Liouvillian in the HEOM. The fourth-order Runge-Kutta method and the time-dependent variational principle are used to propagate the MPS. Several examples, including the nonadiabatic interconversion dynamics of the pyrazine molecule, excitation energy transfer dynamics in molecular aggregates and photosynthetic light-harvesting complexes, the spin-boson model, a laser driven two-state model, the Holstein model, and charge transport in the Anderson impurity model, are presented to demonstrate the capability of the package.
引用
收藏
页数:14
相关论文
共 50 条
  • [21] PyMM: An Open-Source Python']Python Program for QM/MM Simulations Based on the Perturbed Matrix Method
    Chen, Cheng Giuseppe
    Nardi, Alessandro Nicola
    Amadei, Andrea
    D'Abramo, Marco
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2023, 19 (01) : 33 - 41
  • [22] AlphaPeptStats: an open-source Python']Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics
    Krismer, Elena
    Bludau, Isabell
    Strauss, Maximilian T.
    Mann, Matthias
    BIOINFORMATICS, 2023, 39 (08)
  • [23] Principles of development of product lifecycle management system for threaded connections based on the Python']Python programming language
    Kopei, V. B.
    Onysko, O. R.
    Panchuk, V. G.
    INTERNATIONAL CONFERENCE ON APPLIED SCIENCES, 2020, 1426
  • [24] Development of a Power Flow Software for Distribution System Analysis Based on Rectangular Voltage Using Python']Python Software Package
    Hakim, Lukmanul
    Wahidi, Muhamad
    Handoko, Trisno
    Gusmedi, Hem
    Soedjarwanto, Noer
    Milano, Federico
    2014 6TH INTERNATIONAL CONFERENCE ON INFORMATION TECHNOLOGY AND ELECTRICAL ENGINEERING (ICITEE), 2014, : 255 - 259
  • [25] Spexwavepy: an open-source Python']Python package for X-ray wavefront sensing using speckle-based techniques
    Hu, Lingfei
    Wang, Hongchang
    Sawhney, Kawal
    JOURNAL OF SYNCHROTRON RADIATION, 2024, 31 : 1037 - 1042
  • [26] PyVT: A python']python-based open-source software for visualization and graphic analysis of fluid dynamics datasets
    Liu, Qing
    Qiao, Zheng
    Lv, Yu
    AEROSPACE SCIENCE AND TECHNOLOGY, 2021, 117
  • [27] C++QEDv2 Milestone 10: A C++/Python']Python application-programming framework for simulating open quantum dynamics
    Sandner, Raimar
    Vukics, Andras
    COMPUTER PHYSICS COMMUNICATIONS, 2014, 185 (09) : 2380 - 2382
  • [28] Azimuth, Elevation, and Doppler Shift Estimation for LEO Satellites Based on an Open Source Python Package
    B. El habib Bensikaddour
    D. E. B. Nasri
    A. Hamed
    S. B. D. Kaddouri
    Automatic Control and Computer Sciences, 2023, 57 : 203 - 212
  • [29] AMADAR: a python']python-based package for large scale prediction of Diels-Alder transition state geometries and IRC path analysis
    Isamura, Bienfait K.
    Lobb, Kevin A.
    JOURNAL OF CHEMINFORMATICS, 2022, 14 (01)
  • [30] A Python']Python-Based Open Source System for Geographic Object-Based Image Analysis (GEOBIA) Utilizing Raster Attribute Tables
    Clewley, Daniel
    Bunting, Peter
    Shepherd, James
    Gillingham, Sam
    Flood, Neil
    Dymond, John
    Lucas, Richard
    Armston, John
    Moghaddam, Mahta
    REMOTE SENSING, 2014, 6 (07) : 6111 - 6135