DAS-DDI: A dual-view framework with drug association and drug structure for drug-drug interaction prediction

被引:5
|
作者
Niu, Dongjiang [1 ]
Zhang, Lianwei [1 ]
Zhang, Beiyi [1 ]
Zhang, Qiang [1 ]
Li, Zhen [1 ]
机构
[1] Qingdao Univ, Coll Comp Sci & Technol, 308 NingXia Rd, Qingdao 266071, Shandong, Peoples R China
基金
中国国家自然科学基金;
关键词
Drug-drug interaction; Dual-view; Drug association; Substructure; INJECTION;
D O I
10.1016/j.jbi.2024.104672
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
In drug development and clinical application, drug-drug interaction (DDI) prediction is crucial for patient safety and therapeutic efficacy. However, traditional methods for DDI prediction often overlook the structural features of drugs and the complex interrelationships between them, which affect the accuracy and interpretability of the model. In this paper, a novel dual -view DDI prediction framework, DAS-DDI is proposed. Firstly, a drug association network is constructed based on similarity information among drugs, which could provide rich context information for DDI prediction. Subsequently, a novel drug substructure extraction method is proposed, which could update the features of nodes and chemical bonds simultaneously, improving the comprehensiveness of the feature. Furthermore, an attention mechanism is employed to fuse multiple drug embeddings from different views dynamically, enhancing the discriminative ability of the model in handling multi -view data. Comparative experiments on three public datasets demonstrate the superiority of DAS-DDI compared with other state-of-the-art models under two scenarios.
引用
收藏
页数:10
相关论文
共 50 条
  • [21] A Molecular Fragment Representation Learning Framework for Drug-Drug Interaction Prediction
    He, Jiaxi
    Sun, Yuping
    Ling, Jie
    INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, 2025, 17 (01) : 42 - 58
  • [22] Drug-drug interaction prediction using PASS
    Dmitriev, A. V.
    Filimonov, D. A.
    Rudik, A. V.
    Pogodin, P. V.
    Karasev, D. A.
    Lagunin, A. A.
    Poroikov, V. V.
    SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2019, 30 (09) : 655 - 664
  • [23] DSIL-DDI: A Domain-Invariant Substructure Interaction Learning for Generalizable Drug-Drug Interaction Prediction
    Tang, Zhenchao
    Chen, Guanxing
    Yang, Hualin
    Zhong, Weihe
    Chen, Calvin Yu-Chian
    IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2024, 35 (08) : 10552 - 10560
  • [24] CTF-DDI: Constrained tensor factorization for drug-drug interactions prediction
    Han, Guosheng
    Peng, Lingzhi
    Ding, Aocheng
    Zhang, Yan
    Lin, Xuan
    FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE, 2024, 161 : 26 - 34
  • [25] Network Structure Versus Chemical Information in Drug-Drug Interaction Prediction
    Kefalas, George
    Vogiatzis, Dimitrios
    COMPLEX NETWORKS AND THEIR APPLICATIONS XI, COMPLEX NETWORKS 2022, VOL 1, 2023, 1077 : 402 - 414
  • [26] TP-DDI: A Two-Pathway Deep Neural Network for Drug-Drug Interaction Prediction
    Xie, Jiang
    Zhao, Chang
    Ouyang, Jiaming
    He, Hongjian
    Huang, Dingkai
    Liu, Mengjiao
    Wang, Jiao
    Zhang, Wenjun
    INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, 2022, 14 (04) : 895 - 905
  • [27] DDI-Transform: A neural network for predicting drug-drug interaction events
    Su, Jiaming
    Qian, Ying
    QUANTITATIVE BIOLOGY, 2024, 12 (02) : 155 - 163
  • [28] POINTS TO CONSIDER IN A DRUG-DRUG INTERACTION (DDI) STUDY WITH ORAL CONTRACEPTIVES (OC)
    Yu, C.
    Choi, S.
    Li, L.
    Dave, D.
    Kim, M.
    CLINICAL PHARMACOLOGY & THERAPEUTICS, 2012, 91 : S99 - S99
  • [29] An Ensemble BERT CHEM DDI for Prediction of Side Effects in Drug-Drug Interactions
    Vijayan, Alpha
    Chandrasekar, B. S.
    INTERNATIONAL CONFERENCE ON INNOVATIVE COMPUTING AND COMMUNICATIONS, ICICC 2022, VOL 3, 2023, 492 : 569 - 581
  • [30] Most common interactant drugs in drug-drug interaction (DDI) studies.
    Uppoor, RS
    Marroum, P
    Burnett, A
    Ajayi, F
    Yuan, R
    Svadjian, R
    Balian, JD
    CLINICAL PHARMACOLOGY & THERAPEUTICS, 1998, 63 (02) : 147 - 147