Immune infiltration-related genes regulate the progression of AML by invading the bone marrow microenvironment

被引:1
|
作者
Yu, Shuangmei [1 ]
Jiang, Jiquan [2 ]
机构
[1] Heilongjiang Prov Hosp, Dept Radioimmun, Harbin, Peoples R China
[2] Harbin Med Univ, Dept Lab Diag, Affiliated Hosp 2, Harbin, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2024年 / 15卷
关键词
acute myeloid leukemia; immune infiltration-related genes (IIRGs); WGCNA; LASSO; immune infiltration analysis; bone marrow microenvironment; CANCER; CELLS; MYB; GENOMICS;
D O I
10.3389/fimmu.2024.1409945
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
In this study, we try to find the pathogenic role of immune-related genes in the bone marrow microenvironment of AML. Through WGCNA, seven modules were obtained, among which the turquoise module containing 1793 genes was highly correlated with the immune infiltration score. By unsupervised clustering, the turquoise module was divided into two clusters: the intersection of clinically significant genes in the TCGA and DEGs to obtain 178 genes for mutation analysis, followed by obtaining 17 genes with high mutation frequency. Subsequently, these 17 genes were subjected to LASSO regression analysis to construct a riskscore model of 8 hub genes. The TIMER database, ImmuCellAI portal website, and ssGSEA elucidate that the hub genes and risk scores are closely related to immune cell infiltration into the bone marrow microenvironment. In addition, we also validated the relative expression levels of hub genes using the TCGA database and GSE114868, and additional expression levels of hub genes in AML cell lines in vitro. Therefore, we constructed an immune infiltration-related gene model that identify 8 hub genes with good risk stratification and predictive prognosis for AML.
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页数:14
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