The shelterin component TRF2 mediates columnar stacking of human telomeric chromatin

被引:6
|
作者
Wong, Sook Yi [1 ,3 ]
Soman, Aghil [1 ]
Korolev, Nikolay [1 ]
Surya, Wahyu [1 ]
Chen, Qinming [1 ,4 ]
Shum, Wayne [1 ]
van Noort, John [1 ,2 ]
Nordenskiold, Lars [1 ]
机构
[1] Nanyang Technol Univ, Sch Biol Sci, Singapore 637551, Singapore
[2] Leiden Univ, Huygens Kamerlingh Ones Lab, NL-2333 AL Leiden, Netherlands
[3] Duke NUS Med Sch, Dept Emerging Infect Dis, Singapore 169857, Singapore
[4] M Diagnost PTE LTD, 30 Biopolis St, Singapore 138671, Singapore
来源
EMBO JOURNAL | 2024年 / 43卷 / 01期
关键词
Chromatin Structure; Electron Microscopy; Nucleosome; Shelterin Complex; Telomere; MOLECULE FORCE SPECTROSCOPY; IN-VITRO; DNA ORGANIZATION; PROTEINS TRF1; HISTONE; REVEALS; NUCLEOSOMES; FIBER; DOMAIN; RECONSTITUTION;
D O I
10.1038/s44318-023-00002-3
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Telomere repeat binding factor 2 (TRF2) is an essential component of the telomeres and also plays an important role in a number of other non-telomeric processes. Detailed knowledge of the binding and interaction of TRF2 with telomeric nucleosomes is limited. Here, we study the binding of TRF2 to in vitro-reconstituted kilobasepair-long human telomeric chromatin fibres using electron microscopy, single-molecule force spectroscopy and analytical ultracentrifugation sedimentation velocity. Our electron microscopy results revealed that full-length and N-terminally truncated TRF2 promote the formation of a columnar structure of the fibres with an average width and compaction larger than that induced by the addition of Mg2+, in agreement with the in vivo observations. Single-molecule force spectroscopy showed that TRF2 increases the mechanical and thermodynamic stability of the telomeric fibres when stretched with magnetic tweezers. This was in contrast to the result for fibres reconstituted on the 'Widom 601' high-affinity nucleosome positioning sequence, where minor effects on fibre stability were observed. Overall, TRF2 binding induces and stabilises columnar fibres, which may play an important role in telomere maintenance. Telomere maintenance depends on the structural organisation and compaction of the ends of human chromosomes. Here, structural and biophysical studies uncover a role for the shelterin complex subunit TRF2 in facilitating a compact columnar structure of telomeric chromatin, suggesting coordination across nucleosomes.TRF2 binding to the telomeric nucleosome array does not lead to histone eviction. TRF2 binding results in homogenous compaction of telomeric chromatin fibres. TRF2-induced chromatin compaction enhances telomeric fibre maintenance and stability. Structural and biophysical analyses reveal that TRF2 can impose a unique chromatin architecture coordinated across nucleosomes.
引用
收藏
页码:87 / 111
页数:25
相关论文
共 50 条
  • [31] A Novel Screen for Expression Regulators of the Telomeric Protein TRF2 Identified Small Molecules That Impair TRF2 Dependent Immunosuppression and Tumor Growth
    El Mai, Mounir
    Hreich, Serena Janho dit
    Gaggioli, Cedric
    Roisin, Armelle
    Wagner, Nicole
    Ye, Jing
    Jalinot, Pierre
    Cherfils-Vicini, Julien
    Gilson, Eric
    CANCERS, 2021, 13 (12)
  • [32] TRF2, but not TBP, mediates the transcription of ribosomal protein genes
    Wang, Yuan-Liang
    Duttke, Sascha H. C.
    Chen, Kai
    Johnston, Jeff
    Kassavetis, George A.
    Zeitlinger, Julia
    Kadonaga, James T.
    GENES & DEVELOPMENT, 2014, 28 (14) : 1550 - 1555
  • [33] Shaping human telomeres: from shelterin and CST complexes to telomeric chromatin organization
    Lim, Ci Ji
    Cech, Thomas R.
    NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2021, 22 (04) : 283 - 298
  • [34] TRF2 recruits the Werner syndrome (WRN) exonuclease for processing of telomeric DNA
    Machwe, A
    Xiao, LR
    Orren, DK
    ONCOGENE, 2004, 23 (01) : 149 - 156
  • [35] Activation of p21 following DNA damage transcriptionally controlled by a telomeric shelterin protein TRF2 in a telomere-length dependent fashion
    Chowdhury, Shantanu
    FASEB JOURNAL, 2016, 30
  • [36] The Telomeric Protein TRF2 Regulates Angiogenesis by Binding and Activating the PDGFRβ Promoter
    El Mai, Mounir
    Wagner, Kay-Dietrich
    Michiels, Jean-Francois
    Ambrosetti, Damien
    Borderie, Arnaud
    Destree, Sandrine
    Renault, Valerie
    Djerbi, Nadir
    Giraud-Panis, Marie-Josephe
    Gilson, Eric
    Wagner, Nicole
    CELL REPORTS, 2014, 9 (03): : 1047 - 1060
  • [37] Human Rap1 Interacts Directly with Telomeric DNA and Regulates TRF2 Localization at the Telomere
    Arat, N. Oezlem
    Griffith, Jack D.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (50) : 41583 - 41594
  • [38] Shaping human telomeres: from shelterin and CST complexes to telomeric chromatin organization
    Ci Ji Lim
    Thomas R. Cech
    Nature Reviews Molecular Cell Biology, 2021, 22 : 283 - 298
  • [39] TRF2 recruits the Werner syndrome (WRN) exonuclease for processing of telomeric DNA
    Amrita Machwe
    Liren Xiao
    David K Orren
    Oncogene, 2004, 23 : 149 - 156
  • [40] Role of the telomeric factor TRF2 in post-hypoxic brain damages
    Gao, Shuaiyun
    Huang, Sheng
    Xu, Yiwen
    Wang, Bo
    Cheng, Peng
    Lu, Yiming
    Gilson, Eric
    Ye, Jing
    REDOX BIOLOGY, 2024, 75