Background and purpose Glioblastoma multiforme (GBM) is the most devastating brain tumor with less than 5% of patients surviving 5 years following diagnosis. Many studies have focused on the genetics of GBM with the aim of improving the prognosis of GBM patients. We investigated specific genes whose expressions are significantly related to both the length of the overall survival and the progression-free survival in patients with GBM.Methods We obtained data for 12,042 gene mRNA expressions in 525 GBM tissues from the Cancer Genome Atlas (TCGA) database. Among those genes, we identified independent genes significantly associated with the prognosis of GBM. Receiver operating characteristic (ROC) curve analysis was performed to determine the genes significant for predicting the long-term survival of patients with GBM. Bioinformatics analysis was also performed for the significant genes.Results We identified 33 independent genes whose expressions were significantly associated with the prognosis of 525 patients with GBM. Among them, the expressions of five genes were independently associated with an improved prognosis of GBM, and the expressions of 28 genes were independently related to a poorer prognosis of GBM. The expressions of the ADAM22, ATP5C1, RAC3, SHANK1, AEBP1, C1RL, CHL1, CHST2, EFEMP2, and PGCP genes were either positively or negatively related to the long-term survival of GBM patients.Conclusions Using a large-scale and open database, we found genes significantly associated with both the prognosis and long-term survival of patients with GBM. We believe that our findings may contribute to improving the understanding of the mechanisms underlying GBM.
机构:
Univ Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USA
Duke Univ, Med Ctr, Dept Neurosurg, Durham, NC USAUniv Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USA
Ziv, Michal Nisnboym
Raphael, Itay
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Neurol Surg, Pittsburgh, PA USAUniv Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USA
Raphael, Itay
Drappatz, Jan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USAUniv Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USA
Drappatz, Jan
Marker, Daniel F.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Pittsburgh, Dept Pathol, Med Ctr, Pittsburgh, PA USAUniv Pittsburgh, Med Ctr, Hillman Canc Ctr, Div Hematol & Oncol, Pittsburgh, PA USA
机构:
Monash Univ, Gippsland Med Sch, Churchill, Vic, Australia
Univ Geneva, Dept Neurosurg, Ctr Med Univ Geneva, Fac Med, CH-1211 Geneva 14, SwitzerlandMonash Univ, Gippsland Med Sch, Churchill, Vic, Australia
Smoll, Nicolas R.
Schaller, Karl
论文数: 0引用数: 0
h-index: 0
机构:
Univ Geneva, Dept Neurosurg, Ctr Med Univ Geneva, Fac Med, CH-1211 Geneva 14, SwitzerlandMonash Univ, Gippsland Med Sch, Churchill, Vic, Australia
Schaller, Karl
Gautschi, Oliver P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Geneva, Dept Neurosurg, Ctr Med Univ Geneva, Fac Med, CH-1211 Geneva 14, SwitzerlandMonash Univ, Gippsland Med Sch, Churchill, Vic, Australia
机构:
Dana Farber Canc Inst, Dept Med Oncol, Boston, MA 02215 USA
Brigham & Womens Hosp, Dept Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Dept Neurosurg, Boston, MA 02115 USADana Farber Canc Inst, Dept Canc Biol, Boston, MA 02215 USA