A novel tracking and analysis system for time-lapse cellular imaging of Schizosaccharomyces pombe

被引:0
|
作者
Taniguchi, Kei [1 ]
Kajitani, Takuya [1 ]
Ayano, Takahito [1 ]
Yoshida, Toshiyuki [2 ,3 ]
Oki, Masaya [1 ]
机构
[1] Univ Fukui, Grad Sch Engn, Dept Appl Chem & Biotechnol, 3-9-1 Bunkyo, Fukui 9108507, Japan
[2] Univ Fukui, Grad Sch Engn, 3-9-1 Bunkyo, Fukui 9108507, Japan
[3] Univ Fukui, Life Sci Innovat Ctr, 3-9-1 Bunkyo, Fukui 9108507, Japan
关键词
FISSION YEAST; S-PHASE; SEGMENTATION; CELLS; LINEAGE; METHYLATION; DYNAMICS;
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The significance of employing the parent-progeny relationship tracking technique in single-cell analysis has grown with the passage of time. In this study, fundamental image processing techniques were amalgamated to develop software capable of inferring cell cycle alterations in fission yeasts exhibiting equipartition during division. These methods, exclusively relying on bright-field images as input, could track parent-progeny relationships after cellular division through the assessment of temporal morphological transformation of these cells. In the application of this technique, the software was employed for calculate the intracellular fluorescent dots during every stage of the cell cycle, leveraging the yeast strain GFP-fused Swi6, which is present in cells and binds to chromatin. The results obtained with this software were consistent with those of previous studies. This software facilitated the single-cell level tracking of parent-progeny relationships in cells exhibiting equipartition during division and enabled the monitoring of spatial fluctuations in cell cycle-dependent proteins. This method, expediting the analysis of extensive datasets, may also empower large-scale screening experiments that would be unfeasible to conduct manually.
引用
收藏
页数:22
相关论文
共 50 条
  • [41] THE SHAPE OF PORCINE NEURAL PROGENITOR CELL CELLULAR GENEALOGIES REVEALED BY TIME-LAPSE IMAGING
    Faerge, I.
    Egeskov-Madsen, A.
    Holm, P.
    REPRODUCTION FERTILITY AND DEVELOPMENT, 2011, 23 (01) : 245 - 245
  • [42] Time-lapse analysis of retinal differentiation
    Poggi, L
    Zolessi, FR
    Harris, WA
    CURRENT OPINION IN CELL BIOLOGY, 2005, 17 (06) : 676 - 681
  • [43] SEGMENTATION AND TRACKING OF PSEUDOMONAS AERUGINOSA FOR CELL DYNAMICS ANALYSIS IN TIME-LAPSE IMAGES
    Chen, Jianxu
    Cai, Yiqing
    Wei, Chen
    Yang, Lin
    Alber, Mark S.
    Chen, Danny Z.
    2016 IEEE 13TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI), 2016, : 968 - 971
  • [44] Time-lapse analysis of potential cellular responsiveness to Johrei, a Japanese healing technique
    Taft R.
    Moore D.
    Yount G.
    BMC Complementary and Alternative Medicine, 5 (1):
  • [45] Novel autofocus technique advances high-resolution, time-lapse imaging
    Boas, Gary
    Biophotonics International, 2008, 15 (09): : 12 - 13
  • [46] NOVEL INSTRUMENTATION FOR MULTIFIELD TIME-LAPSE CINEMICROGRAPHY
    KALLMAN, RF
    BLEVINS, N
    COYNE, MA
    PRIONAS, SD
    COMPUTERS AND BIOMEDICAL RESEARCH, 1990, 23 (02): : 115 - 129
  • [47] An Explant System for Time-Lapse Imaging Studies of Olfactory Circuit Assembly in Drosophila
    Li, Tongchao
    Luo, Liqun
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2021, (176):
  • [48] An effective assay for high cellular resolution time-lapse imaging of sensory placode formation and morphogenesis
    Shiau, Celia E.
    Das, Raman M.
    Storey, Kate G.
    BMC NEUROSCIENCE, 2011, 12
  • [49] Application of time-lapse ERT imaging to watershed characterization
    Miller, Carlyle R.
    Routh, Partha S.
    Brosten, Troy R.
    McNamara, James P.
    GEOPHYSICS, 2008, 73 (03) : G7 - G17
  • [50] A DISK TAPE SYSTEM FOR TIME-LAPSE VIDEO
    YONEKURA, A
    SMPTE JOURNAL, 1982, 91 (10): : 902 - 905