In-vitro and in-silico analyses of the thrombolytic potential of green kiwifruit

被引:0
|
作者
Pinontoan, Reinhard [1 ]
Purnomo, Jonathan Suciono [1 ]
Avissa, Elvina Bella [1 ]
Tanojo, Jessica Pricilla [2 ]
Djuan, Moses [1 ]
Vidian, Valerie [1 ]
Samantha, Ariela [1 ]
Jo, Juandy [1 ,3 ]
Steven, Eden [2 ,4 ]
机构
[1] Univ Pelita Harapan, Dept Biol, Tangerang 15811, Indonesia
[2] Sekolah Pelita Harapan Lippo Village, Ctr Excellence Appl Sci Acad, Tangerang 15810, Indonesia
[3] Mochtar Riady Inst Nanotechnol, Tangerang 15810, Indonesia
[4] Emmerich Res Ctr, Jakarta 14450, Indonesia
来源
SCIENTIFIC REPORTS | 2024年 / 14卷 / 01期
关键词
Actinidin; Fibrinolytic activity; Green kiwifruit; Molecular docking; Molecular dynamics; Thrombolysis; PROTEIN; DOCKING; FRUITS;
D O I
10.1038/s41598-024-64160-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cardiovascular diseases (CVDs), mainly caused by thrombosis complications, are the leading cause of mortality worldwide, making the development of alternative treatments highly desirable. In this study, the thrombolytic potential of green kiwifruit (Actinidia deliciosa cultivar Hayward) was assessed using in-vitro and in-silico approaches. The crude green kiwifruit extract demonstrated the ability to reduce blood clots significantly by 73.0 +/- 1.12% (P<0.01) within 6 h, with rapid degradation of A alpha and B beta fibrin chains followed by the gamma chain in fibrinolytic assays. Molecular docking revealed six favorable conformations for the kiwifruit enzyme actinidin (ADHact) and fibrin chains, supported by spontaneous binding energies and distances. Moreover, molecular dynamics simulation confirmed the binding stability of the complexes of these conformations, as indicated by the stable binding affinity, high number of hydrogen bonds, and consistent distances between the catalytic residue Cys25 of ADHact and the peptide bond. The better overall binding affinity of ADHact to fibrin chains A alpha and B beta may contribute to their faster degradation, supporting the fibrinolytic results. In conclusion, this study demonstrated the thrombolytic potential of the green kiwifruit-derived enzyme and highlighted its potential role as a natural plant-based prophylactic and therapeutic agent for CVDs.
引用
收藏
页数:13
相关论文
共 50 条
  • [31] Synthesis, single crystal, in-silico and in-vitro assessment of the thiazolidinones
    Aisha
    Raza, Muhammad Asam
    Farwa, Umme
    Rashid, Umer
    Maurin, Jan K.
    Budzianowski, Armand
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1255
  • [32] Synthesis, single crystal, in-silico and in-vitro assessment of the thiazolidinones
    Aisha
    Raza, Muhammad Asam
    Farwa, Umme
    Rashid, Umer
    Maurin, Jan K.
    Budzianowski, Armand
    Journal of Molecular Structure, 2022, 1255
  • [33] In-silico and in-vitro evaluation of human acetylcholinesterase inhibition by organophosphates
    Ranjan, Anuj
    Chauhan, Abhishek
    Jindal, Tanu
    ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY, 2018, 57 : 131 - 140
  • [34] Bioactivity profiling of Sanghuangporus lonicerinus: antioxidant, hypoglycaemic, and anticancer potential via in-vitro and in-silico approaches
    Gafforov, Yusufjon
    Bekic, Sofija
    Yarasheva, Manzura
    Miskovic, Jovana
    Zivanovic, Nemanja
    Chen, Jia Jia
    Petri, Edward
    Abdullaev, Bekhzod
    Rapior, Sylvie
    Lim, Young Won
    Abdullaev, Ikram
    Abbasi, Arshad Mehmood
    Ghosh, Soumya
    Wan-Mohtar, Wan Abd Al Qadr Imad
    Raseta, Milena
    JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY, 2025, 40 (01)
  • [35] Novel pyrimidine-piperazine hybrids as potential antimicrobial agents: in-vitro antimicrobial and in-silico studies
    Rejinthala, Swathi
    Endoori, Srinivas
    Vemula, Divya
    Bhandari, Vasundhra
    Mondal, T.
    RESULTS IN CHEMISTRY, 2023, 5
  • [36] Exploring the antibacterial, antidiabetic, and anticancer potential of Mentha arvensis extract through in-silico and in-vitro analysis
    Faisal, Shah
    Tariq, Muhammad Hamza
    Ullah, Riaz
    Zafar, Sania
    Rizwan, Muhammad
    Bibi, Nadia
    Khattak, Aishma
    Amir, Noora
    Abdullah
    BMC COMPLEMENTARY MEDICINE AND THERAPIES, 2023, 23 (01)
  • [37] Exploring the antibacterial, antidiabetic, and anticancer potential of Mentha arvensis extract through in-silico and in-vitro analysis
    Shah Faisal
    Muhammad Hamza Tariq
    Riaz Ullah
    Sania Zafar
    Muhammad Rizwan
    Nadia bibi
    Aishma Khattak
    Noora Amir
    BMC Complementary Medicine and Therapies, 23
  • [38] Investigation of antioxidant and anticancer potential of fucoidan (in-vitro & in-silico) from brown seaweed Padina boergesenii
    Cholaraj, Ragunath
    Venkatachalam, Ramasubramanian
    ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, 2024, 79
  • [39] Antibiofilm potential of gallic acid against Klebsiella pneumoniae and Enterobacter hormaechei: in-vitro and in-silico analysis
    Rajan, Pooja P.
    Kumar, Praveen
    Mini, Minsa
    Jayakumar, Devi
    Vaikkathillam, Parvathi
    Asha, Sneha
    Mohan, Aparna
    Manjusree, S.
    BIOFOULING, 2023, 39 (9-10) : 948 - 961
  • [40] In-silico and in-vitro identification of triazole based compounds as potential EGFR inhibitors targeting lung cancer
    Kumar, Sunil
    Shukla, Monu Kumar
    Ali, Iqra
    Abbas, Faheem
    Verma, Rachna
    Chandra, Girish
    Kumar, Deepak
    MOLECULAR SIMULATION, 2023, 49 (17) : 1614 - 1631