CROWN ETHER NEUTRAL MOLECULE INTERACTIONS STUDIED BY MOLECULAR MECHANICS, NORMAL MODE ANALYSIS, AND FREE-ENERGY PERTURBATION CALCULATIONS - NEAR QUANTITATIVE AGREEMENT BETWEEN THEORY AND EXPERIMENTAL BINDING FREE-ENERGIES

被引:83
作者
GROOTENHUIS, PDJ [1 ]
KOLLMAN, PA [1 ]
机构
[1] UNIV CALIF SAN FRANCISCO, DEPT PHARMACEUT CHEM, SAN FRANCISCO, CA 94143 USA
关键词
D O I
10.1021/ja00193a042
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
引用
收藏
页码:4046 / 4051
页数:6
相关论文
共 83 条
[1]   CONFORMATIONAL-ANALYSIS .130. MM2 - HYDROCARBON FORCE-FIELD UTILIZING V1 AND V2 TORSIONAL TERMS [J].
ALLINGER, NL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1977, 99 (25) :8127-8134
[2]   MICROFOLDING - CONFORMATIONAL PROBABILITY MAP FOR THE ALANINE DIPEPTIDE IN WATER FROM MOLECULAR-DYNAMICS SIMULATIONS [J].
ANDERSON, AG ;
HERMANS, J .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 3 (04) :262-265
[3]  
[Anonymous], 1982, ACS MONOGRAPH
[4]   FREE-ENERGY CALCULATIONS BY COMPUTER-SIMULATION [J].
BASH, PA ;
SINGH, UC ;
LANGRIDGE, R ;
KOLLMAN, PA .
SCIENCE, 1987, 236 (4801) :564-568
[5]   A NEW TECHNIQUE TO CALCULATE LOW-ENERGY CONFORMATIONS OF CYCLIC MOLECULES UTILIZING THE ELLIPSOID ALGORITHM AND MOLECULAR-DYNAMICS - APPLICATION TO 18-CROWN-6 [J].
BILLETER, M ;
HOWARD, AE ;
KUNTZ, ID ;
KOLLMAN, PA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (25) :8385-8391
[6]   MOLECULAR MECHANICS CALCULATIONS FOR ETHERS - THE CONFORMATIONS OF SOME CROWN ETHERS AND THE STRUCTURE OF THE COMPLEX OF 18-CROWN-6 WITH BENZYLAMMONIUM THIOCYANATE [J].
BOVILL, MJ ;
CHADWICK, DJ ;
SUTHERLAND, IO ;
WATKIN, D .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1980, (10) :1529-1543
[7]   NEW CRYPTOPHANE FORMING UNUSUALLY STABLE INCLUSION COMPLEXES WITH NEUTRAL GUESTS IN A LIPOPHILIC SOLVENT [J].
CANCEILL, J ;
LACOMBE, L ;
COLLET, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (14) :4230-4232
[8]   MOLECULAR RECOGNITION OF BIOLOGICALLY INTERESTING SUBSTRATES - SYNTHESIS OF AN ARTIFICIAL RECEPTOR FOR BARBITURATES EMPLOYING 6 HYDROGEN-BONDS [J].
CHANG, SK ;
HAMILTON, AD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (04) :1318-1319
[9]   CALCULATION OF FREE-ENERGY CHANGES IN ION WATER CLUSTERS USING NONADDITIVE POTENTIALS AND THE MONTE-CARLO METHOD [J].
CIEPLAK, P ;
LYBRAND, TP ;
KOLLMAN, PA .
JOURNAL OF CHEMICAL PHYSICS, 1987, 86 (11) :6393-6403
[10]   CALCULATION OF THE FREE-ENERGY OF ASSOCIATION OF NUCLEIC-ACID BASES IN VACUO AND WATER SOLUTION [J].
CIEPLAK, P ;
KOLLMAN, PA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (12) :3734-3739